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Re: [abinit-forum] performance optimization on Linux cluster


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  • From: Xin Liu <dut_liuxin@yahoo.com.cn>
  • To: forum@abinit.org
  • Subject: Re: [abinit-forum] performance optimization on Linux cluster
  • Date: Tue, 31 Dec 2002 16:35:44 +0800 (CST)

Hi!

I think you should try GIGAbit network! together will
P4 processors.

Xin, Liu

--- fdsa fda <yelinhui1@yahoo.com> 的正文:> Dear
Gonze, dear all,
>
> I'm compiling abinit on a PIII Linux cluster
> connected
> by 100Mbit Ethernet. The binaries are produced with
> little trouble. After some trivial tests I start a
> real complex job, which contains 40 atoms in the
> unit
> cell. I found the performance is not much satisfied.
>
>
> Now I'm considering recompilation by more
> optimization.
>
> I use Intel Fortran Compiler(ifc, unfortunately it
> has
> the same name as the ifc utility of abinit, which
> causes me a little trouble), and MKL math library
> with
> it.
>
> For all source files I use compiler options
>
> FFLAGS="-O3 -w -mp -tp p6 -unroll 3"
>
> For linking I substitute the appended blas and
> lapack
> with MKL:
>
> LIBS=-L/usr/local/lib -lguide -lmkl_def -lmkl_lapack
> -lmkl_p3
>
> OK. The binary(abinip) is smoothly generated.
>
> I'm still testing the new binary. To my expectation
> it
> should be faster than the default one. But, does
> anyone know whether there are still other measures
> to
> gain more optimization in compilatioin?
>
> Another problem, how to gain maximum parallel
> efficience during job run? Suppose I use 8 special
> k-points in Brillouin zone integration, is it
> meaningful to use more than 8 nodes in parallel job?
>
> Regards,
>
>
>
> Linhui
>
>
>
>
>
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