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Re: [abinit-forum] cut3d bug for xcrysden (xsf) o/p


Chronological Thread 
  • From: Steven Homolya <Steven.Homolya@spme.monash.edu.au>
  • To: verstraete@pcpm.ucl.ac.be
  • Cc: abinit <forum@abinit.org>
  • Subject: Re: [abinit-forum] cut3d bug for xcrysden (xsf) o/p
  • Date: Sat, 01 Nov 2003 00:14:52 +1100 (EST)

On Fri, 31 Oct 2003 verstraete@pcpm.ucl.ac.be wrote:

>
> I've noticed that sometimes the density is not centered or is shifted,
> and your mail sounds like an explanation.

To check, I changed the 'physical' grid dimension (say length L in
x-direction) for N data points along x, to L * (N-1) / N, and the
isosurfaces match up with the atom positions perfectly, except that there
are gaps between NN unit cells (because the N+1st redundant data point is
missing).

> If you have time to look at cut3d.f it should be very easy to add.
> Otherwise I'll do so when I have time (aka. unforseen future).
>

For now it might be easier for me to fix up the files by hand or write a
script to do it. I don't have a working f90 compiler...

Steve


--
Steven Homolya
School of Physics and Materials Engineering
Monash University, VIC 3800
Australia
Tel: +61 3 9905 3694
Fax: +61 3 9905 3637




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