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Re: [abinit-forum] response function calculations


Chronological Thread 
  • From: Masayoshi Mikami <mmikami@yk.rim.or.jp>
  • To: forum@abinit.org
  • Subject: Re: [abinit-forum] response function calculations
  • Date: Fri, 04 Jun 2004 08:34:01 +0900

Dear Nichols,

Sorry to have the splitted e-mail, but I just had to add:
- Do you have well-converged DEN/WFK as well as geometry
before RF-calculation ?

- "isecur" has no meaning for RF-calculation:
http://www.abinit.org/ABINIT/Infos_v4.3/vardev.html#isecur

If Gaussian is available, it might also be interesting to
see the difference (numerical difference, CPU-time/resource, ...)?!

Good continuation,
Masayoshi

From: Masayoshi Mikami <mmikami@yk.rim.or.jp>
Subject: Re: [abinit-forum] response function calculations
Date: Fri, 04 Jun 2004 07:47:49 +0900
Message-ID: <20040604074749D.mmikami@yk.rim.or.jp>

> Dear Nichols,
>
> diemac:
> "For molecules in an otherwise empty big box, try 1.5 ... 3.0"
> ( http://www.abinit.org/ABINIT/Infos_v4.3/vargs.html#diemac )
>
> diemix:
> "For molecules, a value on the order 0.5 or 0.33 is rather usual."
> ( http://www.abinit.org/ABINIT/Infos_v4.3/vargs.html#diemix )
>
> Still, I think that some trials and errors might be needed
> for dimiex/diemac for your system ...
>
> Regarding parallel calculation, kindly see
> http://www.abinit.org/ABINIT/Infos/Features/features.html
> and, in particular, "B. Speed in the parallel version (B.2)."
>
> In your case, nkpt = 1/non-spin-polarization (implicitly),
> so parallization of bands (MPI) or FFT (OpenMP) might be tried.
>
> In passing, I might have comments after just skimming the input:
> - typat may be set as "28*1 2"
> - k-point sampling may be carefully tested for such a cluster.
> If more than one k-points could not be practical on your platform,
> still you might want to try Chadi-Cohen's special k-point for
> the Simple Cubic, i.e. (1/4,1/4,1/4). So the comparison with
> kpt=(0,0,0),(1/4,1/4,1/4) and (1/2,1/2,1/2) might be interesting.
>
> Good continuation,
> Masayoshi
>
> From: "Nichols A. Romero" <nromero@uiuc.edu>
> Subject: [abinit-forum] response function calculations
> Date: Thu, 03 Jun 2004 13:54:21 -0500
> Message-ID: <1086288861.26342.50.camel@nromero.physics.uiuc.edu>
>
> > Hi,
> >
> > I'm doing a straightforward phonon calculation for fullerenes in a SC
> > box, just doing q=0,0,0.
> >
> > For each perturbation, I need about 44 SCF cycles to reach convergence.
> > This seems like quite a bit considering that WFK are pre-conditioned
> > with those of the unperturbed groundstate calculation.
> >
> > I'm starting to wonder if I don't have some parameter set incorrectly,
> > e.g. dimiex or diemac.
> >
> > Also, when doing response calculation in parallel does it parallelize
> > trivially? or is it restricted to by the number of kpts and spins.
> >
> > I'm attaching my inputfile.
> >
> > acell 3*25
> > ecut 50 Ry
> > enunit 2
> > natom 29
> > nband 70
> > nstep 500
> > ntypat 2
> > prtvol 3
> > rprim 1.0 0.0 0.0 0.0 1.0 0.0 0.0 0.0 1.0
> > tolwfr 1.0d-16
> > typat
> > 1
> > 1
> > 1
> > 1
> > 1
> > 1
> > 1
> > 1
> > 1
> > 1
> > 1
> > 1
> > 1
> > 1
> > 1
> > 1
> > 1
> > 1
> > 1
> > 1
> > 1
> > 1
> > 1
> > 1
> > 1
> > 1
> > 1
> > 1
> > 2
> > xcart
> > 4.4435614233E+00 1.0045927297E+00 -9.9912245547E-01
> > 3.2965031371E+00 3.2924841976E+00 9.9445554601E-02
> > 3.2952950752E+00 1.2483220506E-01 3.3088090978E+00
> > 2.7922564088E+00 2.8094949302E+00 2.7904077156E+00
> > 4.4427561909E+00 -1.0040210357E+00 1.0361334566E+00
> > 1.0186213957E-01 3.3084170519E+00 3.2820400623E+00
> > -1.0124523765E+00 1.0318305743E+00 4.4363209562E+00
> > -4.4301068320E+00 1.0038928391E+00 1.0062795413E+00
> > -3.2909476236E+00 -9.5028092171E-02 3.2980952239E+00
> > -3.2900531739E+00 3.2808172295E+00 -1.2229033865E-01
> > -1.0114343590E+00 4.4332709764E+00 9.9011297272E-01
> > 3.3082585306E+00 -1.2797379812E-01 -3.2762804606E+00
> > 1.0262468582E+00 9.7665942078E-01 -4.4295823097E+00
> > -9.5186324265E-02 3.2648857676E+00 -3.3051643836E+00
> > 1.0144251158E+00 4.4231692966E+00 -1.0281255165E+00
> > 1.0126929243E+00 -9.8689022357E-01 4.4532604958E+00
> > 3.3070563126E+00 -3.2953604332E+00 -6.6569108040E-02
> > -9.7204936859E-02 -3.2783537919E+00 3.3248643914E+00
> > 1.0245289739E+00 -4.4330279788E+00 1.0523009777E+00
> > 2.8115460348E+00 -2.8141042671E+00 -2.7595757545E+00
> > -2.7858702543E+00 -2.7861620080E+00 2.8167813569E+00
> > -3.2799766672E+00 -3.3046640998E+00 1.3053960501E-01
> > -9.9365225072E-01 -4.4497583973E+00 -9.7341920617E-01
> > -4.4231575807E+00 -1.0314542403E+00 -1.0024239518E+00
> > -2.7841756646E+00 2.7638646311E+00 -2.8068517890E+00
> > -3.2790891114E+00 7.1009957027E-02 -3.2901353093E+00
> > -9.9264928550E-01 -1.0485811504E+00 -4.4200535856E+00
> > 1.2460251418E-01 -3.3216696602E+00 -3.2612500206E+00
> > 7.4755374696E-03 -5.9688480643E-03 9.0676144597E-03
> > znucl 6.0 40.0
> > # ionmov 2
> > # optcell 1
> > # ntime 20
> > diemix 0.99
> > diemac 1.0
> > nline 10
> > isecur 1
> > # needed for later use with phonon calculation
> > istwfk 2
> > # phonon calculation parameters
> > irdwk 1
> > rfphon 1
> > rfatpol 1 29
> > rfdir 1 1 1
> > nqpt 1
> > qpt 0 0 0
> > # may solve mem problems
> > # mkmem 0
> > # mffmem 0
> > # mkqmem 0
> > # mk1mem 0
> > # save disk space
> > prtwf 0
> >
> > Bests,
> > --
> > Nichols A. Romero
> >
> > 4-133 ESB, MC 704 508 East Michigan Avenue
> > 1110 West Green Street Apartment 12
> > Urbana, IL 61801-3080 Urbana, IL 61801-5176
> > (217) 333-6108 (217) 417-5210



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