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- From: "Sergey Lisenkov" <proffess@yandex.ru>
- To: forum@abinit.org
- Subject: Unable full restart on SGI Altix
- Date: Sat, 10 Sep 2005 00:12:59 +0400 (MSD)
Dear abinit authors,
I have a problem with restart option (using restartxf 1 and irdwfk 1) on SGI
altix machine running in parallel (version of ABINIT 4.5.3). I got the next:
-P-0000
-P-0000
================================================================================
-P-0000
-P-0000 - hdr_check: checking restart file header for consistency -
-P-0000
-P-0000
-P-0000 current calculation restart file
-P-0000 ------------------- ------------
-P-0000
-P-0000 calculation expects a wavefunction | input file contains a
wavefunction
-P-0000 ABINIT code version 4.5.3 | ABINIT code version 4.5.3
-P-0000 date 20050909 bantot 1632 natom 24 | date 20050909 bantot 1632
natom 24
-P-0000 nkpt 32 nsym 1 ngfft 75, 90, 75 | nkpt 32 nsym 1 ngfft 75,
90, 75
-P-0000 ntypat 2 ecut_eff 40.0715000 | ntypat 2 ecut_eff
40.0715000
-P-0000 usepaw 0 | usepaw 0
-P-0000 rprimd: | rprimd:
-P-0000 12.9832622 0.0000000 0.0000000 | 12.9832622 0.0000000
0.0000000
-P-0000 0.0000000 15.1991513 0.0000000 | 0.0000000 15.1991513
0.0000000
-P-0000 0.0000000 0.0000000 12.8096720 | 0.0000000 0.0000000
12.8096720
-P-0000 nband: | nband:
-P-0000 51 51 51 51 51 51 51 51 51 | 51 51 51 51 51 51
51 51 51
-P-0000 51 51 51 51 51 51 51 51 51 | 51 51 51 51 51 51
51 51 51
-P-0000 51 51 51 51 51 51 51 51 51 | 51 51 51 51 51 51
51 51 51
-P-0000 51 51 51 51 51 | 51 51 51 51 51
-P-0000 symafm: | symafm:
-P-0000 1 | 1
-P-0000 symrel: | symrel:
-P-0000 1 0 0 0 1 0 0 0 1 | 1 0 0 0 1 0 0 0 1
-P-0000 typat: | typat:
-P-0000 1 1 1 1 1 1 1 1 1 1 1 1 | 1 1 1 1 1 1 1 1
1 1 1 1
-P-0000 2 2 2 2 2 2 2 2 2 2 2 2 | 2 2 2 2 2 2 2 2
2 2 2 2
-P-0000 so_typat: | so_typat:
-P-0000 1 1 | 1 1
-P-0000 istwfk: | istwfk:
-P-0000 1 1 1 1 1 1 1 1 1 1 1 1 | 1 1 1 1 1 1 1 1
1 1 1 1
-P-0000 1 1 1 1 1 1 1 1 1 1 1 1 | 1 1 1 1 1 1 1 1
1 1 1 1
-P-0000 1 1 1 1 1 1 1 1 | 1 1 1 1 1 1 1 1
-P-0000 kpt: | kpt:
-P-0000 0.1250000 0.1250000 0.1250000 | 0.1250000 0.1250000
0.1250000
-P-0000 0.3750000 0.1250000 0.1250000 | 0.3750000 0.1250000
0.1250000
-P-0000 -0.3750000 0.1250000 0.1250000 | -0.3750000 0.1250000
0.1250000
-P-0000 -0.1250000 0.1250000 0.1250000 | -0.1250000 0.1250000
0.1250000
-P-0000 0.1250000 0.3750000 0.1250000 | 0.1250000 0.3750000
0.1250000
-P-0000 occ: | occ:
-P-0000 2.0 2.0 2.0 2.0 2.0 2.0 2.0 2.0 2.0 | 2.0 2.0 2.0 2.0 2.0 2.0
2.0 2.0 2.0
-P-0000 2.0 2.0 2.0 2.0 2.0 2.0 2.0 2.0 2.0 | 2.0 2.0 2.0 2.0 2.0 2.0
2.0 2.0 2.0
-P-0000 2.0 2.0 2.0 2.0 2.0 2.0 2.0 2.0 2.0 | 2.0 2.0 2.0 2.0 2.0 2.0
2.0 2.0 2.0
-P-0000 2.0 2.0 2.0 2.0 2.0 2.0 2.0 2.0 2.0 | 2.0 2.0 2.0 2.0 2.0 2.0
2.0 2.0 2.0
-P-0000 2.0 2.0 2.0 2.0 2.0 2.0 2.0 2.0 2.0 | 2.0 2.0 2.0 2.0 2.0 2.0
2.0 2.0 2.0
-P-0000 tnons: | tnons:
-P-0000 0.0000000 0.0000000 0.0000000 | 0.0000000 0.0000000
0.0000000
-P-0000 znucl: | znucl:
-P-0000 14.00 6.00 | 14.00 6.00
-P-0000 pseudopotential atom type 1: | pseudopotential atom type
1:
-P-0000 pspso 1 pspxc 11 | pspso 1 pspxc 11
-P-0000 pspdat 21003 pspcod 6 zion 4.0 | pspdat 21003 pspcod 6
zion 4.0
-P-0000 pseudopotential atom type 2: | pseudopotential atom type
2:
-P-0000 pspso 1 pspxc 11 | pspso 1 pspxc 11
-P-0000 pspdat 21003 pspcod 6 zion 4.0 | pspdat 21003 pspcod 6
zion 4.0
-P-0000 xred: | xred:
-P-0000 0.1144277 0.5517489 0.7225773 | 0.1144277 0.5517489
0.7225773
-P-0000 0.0908756 0.3329375 0.4209751 | 0.0908756 0.3329375
0.4209751
-P-0000 0.4450291 0.8155118 0.7202048 | 0.4450291 0.8155118
0.7202048
-P-0000 0.7199967 0.8163552 0.4420462 | 0.7199967 0.8163552
0.4420462
-P-0000 0.2914532 0.6627299 0.2920687 | 0.2914532 0.6627299
0.2920687
-P-0000 0.7198764 0.5516796 0.1137246 | 0.7198764 0.5516796
0.1137246
-P-0000 0.8400799 0.6721120 0.8397140 | 0.8400799 0.6721120
0.8397140
-P-0000 0.4258346 0.3344296 0.0894090 | 0.4258346 0.3344296
0.0894090
-P-0000 0.8306950 0.2097484 0.2532817 | 0.8306950 0.2097484
0.2532817
-P-0000 0.2623603 0.2156489 0.8244566 | 0.2623603 0.2156489
0.8244566
-P-0000 0.4390671 0.0630736 0.4370046 | 0.4390671 0.0630736
0.4370046
-P-0000 0.7088985 0.0732171 0.7107635 | 0.7088985 0.0732171
0.7107635
-P-0000 0.0621035 0.5734863 0.4043033 | 0.0621035 0.5734863
0.4043033
-P-0000 0.0303881 0.3129036 0.7351780 | 0.0303881 0.3129036
0.7351780
-P-0000 0.7201772 0.8391278 0.7213878 | 0.7201772 0.8391278
0.7213878
-P-0000 0.4336308 0.8104466 0.4317623 | 0.4336308 0.8104466
0.4317623
-P-0000 0.3397865 0.6337680 0.8548274 | 0.3397865 0.6337680
0.8548274
-P-0000 0.8560047 0.6352845 0.3368765 | 0.8560047 0.6352845
0.3368765
-P-0000 0.4069443 0.5727494 0.0640566 | 0.4069443 0.5727494
0.0640566
-P-0000 0.7275850 0.3173180 0.0315450 | 0.7275850 0.3173180
0.0315450
-P-0000 0.3311507 0.2533311 0.3300543 | 0.3311507 0.2533311
0.3300543
-P-0000 0.8491814 0.2400655 0.8543946 | 0.8491814 0.2400655
0.8543946
-P-0000 0.7171923 0.0606609 0.4182615 | 0.7171923 0.0606609
0.4182615
-P-0000 0.4212485 0.0607606 0.7189093 | 0.4212485 0.0607606
0.7189093
-P-0000 hdr_check: Wavefunction file is OK for direct restart of calculation
-P-0000
================================================================================
-P-0000 initwf : disk file gives npw= 30626 nband= 51 for k pt number=
1
-P-0000 initwf : 51 bands have been initialized from disk
-P-0000 initwf : disk file gives npw= 30631 nband= 51 for k pt number=
2
-P-0000 initwf : 51 bands have been initialized from disk
-P-0000 initwf : disk file gives npw= 30631 nband= 51 for k pt number=
3
-P-0000 initwf : 51 bands have been initialized from disk
-P-0000 initwf : disk file gives npw= 30626 nband= 51 for k pt number=
4
-P-0000 initwf : 51 bands have been initialized from disk
-P-0000 leave_test : synchronization done...
wfsinp: loop on k-points and spins done in parallel
pareigocc : MPI_ALLREDUCE
-P-0000 leave_test : synchronization done...
wfsinp: loop on k-points done in parallel
newkpt : in paral mode, only node 0 describes in the main output file the
copying of wfs.
-P-0000 leave_test : synchronization done...
newkpt: loop on k-points done in parallel
pareigocc : MPI_ALLREDUCE
gstate : BUG -
An error occurred reading the input wavefunction file,
with restartxf=1.
Action : contact ABINIT group.
Delivered 0 WARNINGs and 1 COMMENTs to log file.
-P-0000
-P-0000 leave_new : decision taken to exit ...
The WFK file was created after interrupted run. When I remove "restartxf 1" -
everything is OK. Is it normal?
THanks,
Sergey
- Unable full restart on SGI Altix, Sergey Lisenkov, 09/09/2005
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