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Re: Re: [abinit-forum] convergence of large unit cell


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  • From: Szieberth Denes <dino@iris.inc.bme.hu>
  • To: forum@abinit.org
  • Subject: Re: Re: [abinit-forum] convergence of large unit cell
  • Date: Thu, 15 Sep 2005 00:27:24 +0200 (CEST)



On Wed, 14 Sep 2005 paul.boulanger@umontreal.ca wrote:

Hi Denes (and Hi Mikami),

The system considered is very interesting.

yeah, that's why I'm trying to investigate it :)


Usually, to minimize the numbers of atoms we can replace CH3 by H only, which diminishes the number of atoms by 60 in your case. This permutation does not change the electronic properties too much;

Thanks, I see now that it would seriously be a reduction... a bit hard to forget the full electron GTO based reflex that H and C holds so much less electrons than the others... for the purpose of finding the calculation parameters that work this substitution should be OK, I'm already doing it :). For the "final" purpose (which is trying to differentiate between two possible structures) it may be necessary to take into account the effect of the methyl groups. But since I still can't achieve convergence of the wave function even for the smaller case it's not very pressing...

Another point, that can be important before relaxing your system, is to inspect the geometries of every site. We see that the bond between the Cu and P at one of your Mo site seems a little strange, considering the other sites.
Maybe manual cleaning will help the convergence of the relaxation and
of the SCF.

Hmm. Which one is that? I usually use cut3d/xcrysden for periodic structures, it makes to see the bonds passing through the unit cell boundaries easier. For my eyes the 3 P-Cu bonds are similar but not equivalent, but since two are "chain-forming" and the third is toward a "side-group" it is understandable. Of course finding an error in the initial geometry would nicely explain the SCF convergence failure, but as yet I don't see this error.

cheers,
Denes






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