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- From: "Chun Li" <lichun@nuaa.edu.cn>
- To: <forum@abinit.org>
- Subject: successful compilation, but failing calculation?
- Date: Thu, 10 Nov 2005 21:08:28 +0800
Dear abinit users,
I compiled parallel abinit-4.6.5 on the linux cluster. The abinip was made
successfully. The following is the makefile_macros file I used:
####################################################################
# For the sequential version
# Machine type
MACHINE=P6
# Fortran optimized compilation
#FC=/opt/intel/compiler50/ia32/bin/ifc # first time of the compilation of
abinip, use this.
FC=/opt/mpich/intel/bin/mpif90 # After the failure of compilation, use this.
FFLAGS=-FR -O3 -w -cl,../Machine_dept_files/Intel_P6/my_work.pcl
FFLAGS_LIBS= -O3 -w
# C preprocessor, used to preprocess the fortran source.
CPP=/usr/bin/cpp
CPP_FLAGS=-P -traditional -D__IFC
# The cpp directive CHGSTDIO changes the standard I/O definition
# Uncomment the next line for this to happen.
#CPP_FLAGS=-P -DCHGSTDIO
# C optimized compilation.
CC=/usr/bin/cc
CFLAGS=-O
# Location of perl . Used to generate the script fldiff, in ~ABINIT/Utilities
.
PERL=/usr/bin/perl
# List of machine-dependent routines
MACHINE_DEP_C_SEQ_SUBS_LIST=etime.o
####################################################################
# For the parallel version : MPICH / MYRINET
# Compiler flags and definitions
FFLAGS_PAR= $(FFLAGS) -I /opt/mpich/intel/include
# List of machine-dependent routines
MACHINE_DEP_C_PAR_SUBS_LIST=etime.par
# Location of the MPI library
MPI_A=/opt/mpich/intel/lib/libmpich.a
# Include blas, lapack, and any other libraries here
LIBS_PAR=$(LIBS) $(MPI_A)
# This is a last line in makefile_macros ----------
But when I tried to submit my tasks on the cluster with multi-processors (The
calculations run smoothly when I tried using single-processor.), the
calculation always stops at the beginning with the following messages in the
end of the log file:
ITER STEP NUMBER 1
vtorho : nnsclo_now= 2, note that nnsclo,dbl_nnsclo,istep= 0 0 1
-P-0000 leave_test : synchronization done...
vtorho: loop on k-points and spins done in parallel
Is this the compilation problem or other problems? Hope anyone here with
experiences can give me some advice. Thanks a lot.
Best regards.
Chun Li
- successful compilation, but failing calculation?, Chun Li, 11/10/2005
- Re: [abinit-forum] successful compilation, but failing calculation?, Chun Li, 11/11/2005
- Re: [abinit-forum] successful compilation, but failing calculation?, Anglade Pierre-Matthieu, 11/11/2005
- Re: [abinit-forum] successful compilation, but failing calculation?, Chun Li, 11/16/2005
- Re: [abinit-forum] successful compilation, but failing calculation?, Anglade Pierre-Matthieu, 11/16/2005
- Re: [abinit-forum] successful compilation, but failing calculation?, Chun Li, 11/16/2005
- Re: [abinit-forum] successful compilation, but failing calculation?, Anglade Pierre-Matthieu, 11/11/2005
- Re: [abinit-forum] successful compilation, but failing calculation?, Chun Li, 11/11/2005
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