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about paralle calculation using abinip


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  • From: zmq.lyao@gmail.com
  • To: forum@abinit.org
  • Subject: about paralle calculation using abinip
  • Date: Thu, 19 Jan 2006 10:18:46 +0100

Deal All,
I met a problem about runing abinip(build by PGI5.2 and mpich2 using
4.6.5 version source) on a cluster. The cluster has 4 nodes and each node has
4 CPUs.
When I start mpd on one node and mpirun -np (mumber of cpu) abinip
<files>&log, it is ok. But, if I use lamboot and mpirun,it don't work.
The boot of LAM is no problem. The log file gives information like this:

PGFIO-F-217/formatted read/unit=5/attempt to read past end of file.
File name = stdin formatted, sequential access record = 1
In source file iofn1.par.f90, at line number 85
ABINIT

Give name for formatted input file:
-----------------------------------------------------------------------------
It seems that [at least] one of processes that was started with mpirun
did not invoke MPI_INIT before quitting (it is possible that more than
one process did not invoke MPI_INIT -- mpirun was only notified of the
first one, which was on node n0).

mpirun can *only* be used with MPI programs (i.e., programs that
invoke MPI_INIT and MPI_FINALIZE). You can use the "lamexec" program
to run non-MPI programs over the lambooted nodes.



Somebody knows the reason? Thanks in advance.

Best regards,

Zeming


  • about paralle calculation using abinip, zmq . lyao, 01/19/2006

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