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Re: [abinit-forum] Molecular Dynamics : particles going out of the box


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  • From: Per Andersson <perand@foi.se>
  • To: forum@abinit.org
  • Subject: Re: [abinit-forum] Molecular Dynamics : particles going out of the box
  • Date: Thu, 02 Mar 2006 13:20:01 +0100

vinayak@ipr.res.in wrote:
Dear Abinit users.

I'm trying to do MD simulation of the compressed Hydrogen fluid with the
time step of 12atu to calculate the energy . I found that after 100 MD steps
particles are away from the simulation box. Is the simulation running
properly?? Your reply will be highly appreciated.

Thanks & Regards
Vinayak Mishra,
Institute for Plasma research,
Bhat, Gandhinagar-382428, India.



I am doing similar calculations with 128 atoms. Your
timestep seems rather large, I had to go as low as 3 a.u. to get
good convergence for cryogenic temperatures (and as low as 0.5
for higher temperatures). Please take a look at your results.

The atoms leaving the box will be "folded" back as the box is
a part of a repeated lattice.

/Per Andersson



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