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Re: [abinit-forum] ANADDB persisting segamentation fault


Chronological Thread 
  • From: Matthieu Verstraete <mjv500@york.ac.uk>
  • To: forum@abinit.org
  • Subject: Re: [abinit-forum] ANADDB persisting segamentation fault
  • Date: Fri, 19 May 2006 11:33:21 +0100 (BST)


Ok, this may be it: you may still not doing all the perturbations. By setting rfatpol15 1 3 abinit still finds the equivalent atoms and does only one. You have to specify

rfatpol15 1 1 rfdir15 1 0 0 rfphon15 1 tolvrs15 1.0e-5 getwfk15 1
getwfq15 14 kptopt15 3 nqpt15 1 qpt15 0 0 1/3
rfatpol16 1 1 rfdir16 0 1 0 rfphon16 1 tolvrs16 1.0e-5 getwfk16 1
getwfq16 14 kptopt16 3 nqpt16 1 qpt16 0 0 1/3
rfatpol17 1 1 rfdir17 0 0 1 rfphon17 1 tolvrs17 1.0e-5 getwfk17 1
getwfq17 14 kptopt17 3 nqpt17 1 qpt17 0 0 1/3

rfatpol15 2 2 rfdir15 1 0 0 rfphon15 1 tolvrs15 1.0e-5 getwfk15 1
getwfq15 14 kptopt15 3 nqpt15 1 qpt15 0 0 1/3
rfatpol16 2 2 rfdir16 0 1 0 rfphon16 1 tolvrs16 1.0e-5 getwfk16 1
getwfq16 14 kptopt16 3 nqpt16 1 qpt16 0 0 1/3
rfatpol17 2 2 rfdir17 0 0 1 rfphon17 1 tolvrs17 1.0e-5 getwfk17 1
getwfq17 14 kptopt17 3 nqpt17 1 qpt17 0 0 1/3

rfatpol15 3 3 rfdir15 1 0 0 rfphon15 1 tolvrs15 1.0e-5 getwfk15 1
getwfq15 14 kptopt15 3 nqpt15 1 qpt15 0 0 1/3
rfatpol16 3 3 rfdir16 0 1 0 rfphon16 1 tolvrs16 1.0e-5 getwfk16 1
getwfq16 14 kptopt16 3 nqpt16 1 qpt16 0 0 1/3
rfatpol17 3 3 rfdir17 0 0 1 rfphon17 1 tolvrs17 1.0e-5 getwfk17 1
getwfq17 14 kptopt17 3 nqpt17 1 qpt17 0 0 1/3

(changing the dtset number of course) to force it. If for a given qpoint the atoms are not equivalent (ie any qpoint which is not symmetrical in the plane) then all the 1WF will be generated, but for 0 0 1/3 certainly not. It does look from your gkk.in file that all the files are there, though... Strange. Might be because you do 1 direction at a time, and idir 1 for atom 2 is equivalent to idir 2 for atom 1 (something like that). If you do have the correct nqpoint*3*natom files, then nevermind.

In gdb, type "up" to go to the calling subroutine. the _intel stuff is the compiler's library routines, not abinit. Keep up-ing until you find something abinity, and you can send me the whole list of called subroutines.

M.

--

================================================================
Dr. Matthieu Verstraete mailto:mjv500@york.ac.uk
Dept. of Physics, University of York, tel: +44 1904 43 22 08
Heslington, YO10 5DD York, United Kingdom fax: +44 1904 43 22 14



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