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- From: "Shtogun, Yaroslav" <yshtogun@cas.usf.edu>
- To: <forum@abinit.org>
- Subject: RE: [abinit-forum] Convergence
- Date: Fri, 16 Jun 2006 16:42:46 -0400
Hi! "Bobryi Den' Usim"
- Thank you to everybody for help. I just get convergence very fest with
Pierre-Matthieu Anglade' advice - "iprcel 49" just 13 steps.
- I used default value for tsmear - 0.04.
- I didn't check jet convergence according k-points mesh, but I did
this for (7,0) CNT and 1x1x4 was the best, but I will look at it. Also,
I investigate convergence according ecut and I decide to take 32Ha
because the difference between 32 and 34 Ha was very small. The size of
unit cell is big for my future calculation; I need size of unit cell
where I can neglect interaction between nearest nanotubes - 12R is good.
Thank you,
Yaroslav Shtogun
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University of South Florida
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-----Original Message-----
From: Masayoshi Mikami [mailto:mmikami@rc.m-kagaku.co.jp]
Sent: Thursday, June 15, 2006 9:12 PM
To: forum@abinit.org
Subject: Re: [abinit-forum] Convergence
Dear Yaroslav Shtogun,
Hello. ("dobry den" in Ukrainian ? Just a guess, if not, sorry.)
I have just noticed something in your input.
You should use tsmear, not "ecutsm",
along with occopt (3, 4, 5, 6, or 7) for such a "metallic" case.
Please consult with the help files.
http://www.abinit.org/Infos_v4.6/varbas.html#occopt
http://www.abinit.org/Infos_v4.6/vargs.html#tsmear
In passing, "ecutsm" is used for geometry optimization
including cell volume.
http://www.abinit.org/Infos_v4.6/varrlx.html#ecutsm
If you are not familiar with these variables,
just have fun with Tutorials/Test_* in ABINIT tar.gz ball.
Have a nice weekend.
Good continuation,
Masayoshi
P.S. Thanks for following the Netiquette. (i.e. input attachment !)
Speaking of Netiquette, not a few ABINITioners here on this ML
might also want to read the following WEB page by Eric S. Raymond.
"How To Ask Questions The Smart Way"
http://www.catb.org/~esr/faqs/smart-questions.html
There are not a few translations available there. Enjoy !
On 2006/06/15, at 23:52, Anglade Pierre-Matthieu wrote:
> Hi,
>
> Your preconditioning is not correct. There is two problem with it:
> your nanotube is metallic so you must expect a higher value for diemac
> and your cell is not homogeneous (lots of vacuum). You'd better use
> "iprcel 49" instead of "diemac 12" it will certainly helps a lot.
>
> regards
>
> PMA
>
> On 6/15/06, yshtogun@cas.usf.edu <yshtogun@cas.usf.edu> wrote:
>> Convergence
>> Dear ABINIT users!
>> I try to calculate Etotal for metal carbon nanotubes, but I was
>> not able to reach convergence. I saw that in my output file Etotal
>> starts wobbling around some value, I looked at lesson for Al and
>> did the same way. There is my out put file:
>>
>> ETOT 81 -138.61248625690 -1.621E-02 7.759E-02 4.898E+03
>> 7.247E-02 6.434E-02
>> ETOT 82 -138.59572056047 1.677E-02 8.067E-02 4.905E+03
>> 7.189E-02 6.463E-02
>> ETOT 83 -138.59789426457 -2.174E-03 9.536E-02 4.916E+03
>> 7.272E-02 6.541E-02
>> ETOT 84 -138.59854520570 -6.509E-04 8.775E-02 4.917E+03
>> 7.350E-02 6.541E-02
>> ETOT 85 -138.59404342836 4.502E-03 9.851E-02 4.921E+03
>> 7.384E-02 6.486E-02
>> ETOT 86 -138.59218749179 1.856E-03 9.981E-02 4.921E+03
>> 7.315E-02 6.471E-02
>> ETOT 87 -138.58897216161 3.215E-03 1.020E-01 4.922E+03
>> 7.301E-02 6.429E-02
>> ETOT 88 -138.59681906813 -7.847E-03 1.188E-01 4.918E+03
>> 7.280E-02 6.450E-02
>> ETOT 89 -138.60192171587 -5.103E-03 1.160E-01 4.911E+03
>> 7.209E-02 6.342E-02
>> ETOT 90 -138.63243709379 -3.052E-02 1.452E-01 4.891E+03
>> 7.288E-02 6.528E-02
>> ETOT 91 -138.67069938233 -3.826E-02 1.283E-01 4.855E+03
>> 7.464E-02 6.543E-02
>> ETOT 92 -138.65744598321 1.325E-02 9.016E-02 4.839E+03
>> 7.518E-02 6.583E-02
>> ETOT 93 -138.69142100515 -3.398E-02 1.003E-01 4.840E+03
>> 7.397E-02 6.380E-02
>> ETOT 94 -138.67800496752 1.342E-02 1.362E-01 4.844E+03
>> 7.331E-02 6.517E-02
>> ETOT 95 -138.78701676235 -1.090E-01 1.661E-01 4.777E+03
>> 7.236E-02 5.931E-02
>> ETOT 96 -138.81659394107 -2.958E-02 8.866E-02 4.738E+03
>> 7.003E-02 6.284E-02
>> ETOT 97 -138.76127302580 5.532E-02 1.127E-01 4.780E+03
>> 7.247E-02 6.457E-02
>> ETOT 98 -138.83699500452 -7.572E-02 1.895E-01 4.735E+03
>> 7.125E-02 6.081E-02
>> ETOT 99 -138.84379116069 -6.796E-03 8.810E-02 4.714E+03
>> 7.024E-02 6.172E-02
>> ETOT100 -138.78397012486 5.982E-02 1.138E-01 4.761E+03
>> 7.426E-02 6.483E-02
>>
>> My input file:
>> # (6,6) Carbon Nanotube : computation of the total energy
>> # bond legth a = 1.419 angstrom 1 unit cell
>> # the potential files - 6c.pspnc LDA (Troullier - Martins)
>>
>>
>> #Definition of the unit cell
>> acell 48.7816266774 48.7816266774 2.4577800959 angstrom # The
>> size of unit cell in angstrom
>>
>>
>> #Definition of the atom types
>> ntypat 1 # There is only one type of atom
>> znucl 6 # The keyword "znucl" refers to the atomic
>> number of the
>> # possible type(s) of atom. The pseudopotential(s)
>> # mentioned in the "files" file must correspond
>> # to the type(s) of atom. Here, the only type is
>> Silicon.
>>
>>
>> #Definition of the atoms
>> natom 24 # There are 24 atoms
>> typat 24*1
>> # They all are of type 1, that is, Carbon.
>>
>> xangst # This keyword indicate that the location of the
>> atoms
>> # will follow, one triplet of number for each atom
>> # Triplet giving the cartesian coordinates of
>> all atoms, in Angstrom
>> 28.4559489387 24.3908133387 0.0000000000
>> 28.2107912387 25.7811715387 0.0000000000
>> 26.4233811387 27.9113240387 0.0000000000
>> 25.0967167387 28.3941903387 0.0000000000
>> 22.3582455387 27.9113240387 0.0000000000
>> 21.2767388387 27.0038321387 0.0000000000
>> 20.3256777387 24.3908133387 0.0000000000
>> 20.5708354387 23.0004551387 0.0000000000
>> 22.3582455387 20.8703026387 0.0000000000
>> 23.6849099387 20.3874363387 0.0000000000
>> 26.4233811387 20.8703026387 0.0000000000
>> 27.5048878387 21.7777945387 0.0000000000
>> 27.9113240387 26.4233811387 1.2288900000
>> 27.0038321387 27.5048878387 1.2288900000
>> 24.3908133387 28.4559489387 1.2288900000
>> 23.0004551387 28.2107912387 1.2288900000
>> 20.8703026387 26.4233811387 1.2288900000
>> 20.3874363387 25.0967167387 1.2288900000
>> 20.8703026387 22.3582455387 1.2288900000
>> 21.7777945387 21.2767388387 1.2288900000
>> 24.3908133387 20.3256777387 1.2288900000
>> 25.7811715387 20.5708354387 1.2288900000
>> 27.9113240387 22.3582455387 1.2288900000
>> 28.3941903387 23.6849099387 1.2288900000
>>
>> #Definition of the planewave basis set
>> ecut 20.0 # Maximal kinetic energy cut-off, in Hartree
>>
>> #Exchange-correlation functional
>> ixc 1 # LDA Teter Pade parametrization
>> #iscf 2
>>
>> ecutsm 0.5
>>
>> #Definition of the k-point grid
>> kptopt 1 # Option for the automatic generation of k
>> points, taking
>> # into account the symmetry
>> ngkpt 1 1 4 # This is a 1x1x4 grid based on the primitive
>> vectors
>> nshiftk 1
>> shiftk 0 0 0.5
>>
>>
>> #Definition of the SCF procedure
>> nstep 100 # Maximal number of SCF cycles
>> toldfe 1.0d-6 # Will stop when, twice in a row, the difference
>> # between two consecutive evaluations of total
>> energy
>> # differ by less than toldfe (in Hartree)
>> diemac 12.0 # Although this is not mandatory, it is worth to
>> # precondition the SCF cycle. The model dielectric
>> # function used as the standard preconditioner
>> # is described in the "dielng" input variable
>> section.
>> # Here, we follow the prescription for carbon.
>>
>> Should I specify some other parameters?
>> I appreciate all suggestion and comments.
>>
>> Thank you in advance!
>>
>> Yaroslav!
>>
>>
>
>
> --
> Pierre-Matthieu Anglade
>
- Re: [abinit-forum] Convergence, zhangting, 06/16/2006
- <Possible follow-up(s)>
- Re: [abinit-forum] Convergence, zhangting, 06/16/2006
- RE: [abinit-forum] Convergence, Shtogun, Yaroslav, 06/16/2006
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