forum@abinit.org
Subject: The ABINIT Users Mailing List ( CLOSED )
List archive
- From: Chao Cao <cao@qtp.ufl.edu>
- To: forum@abinit.org
- Subject: [BUG?] MPI Abinit 5 cannot calculate GW?
- Date: Wed, 09 May 2007 01:47:00 -0400
Dear abinit users:
I compiled latest abinit (version 5.3.4, 5.2.4 was also tried) with mpi parallel support. It was compiled with pathscale compiler/ACML library/Open MPI 1.1.4. Everything compiled OK and all the sequential tests were passed. Parallel execution of abinit (abinip) for ground state calculations were also performed without error. However, when I test on GW calculations, the code would always stop with errors.
For example, when I perform test_v4 t88, the code will stop after it goes into data set 2. In the log file (redirected from standard output), it stops at:
......
......
End the ECHO of the ABINIT file header
===============================================================================
Results from ABINIT code
Ab-initio plane waves calculation
Results from ABINIT code Ab-initio plane waves calculation number of electrons 8
number of symmetries without inversion 24
number of bands 30
number of plane waves 89
......
......
vkbsign: 1.0 1.0 0.0
k eigenvalues [eV]
1 -6.16 5.85 5.85 5.85 8.37 8.37 8.37 8.97 13.42 13.85
2 -5.35 1.88 5.07 5.07 7.73 9.34 9.34 12.53 13.18 13.18
3 -3.79 -1.20 4.62 4.62 7.26 9.19 9.19 13.33 16.71 16.71
4 -5.07 2.33 3.91 3.91 6.90 8.90 11.60 11.60 13.71 15.07
5 -3.42 -0.57 2.24 3.60 7.28 10.25 11.49 11.78 15.93 16.53
6 -4.10 0.33 2.02 4.49 8.21 10.60 10.92 11.81 12.40 15.39
7 -2.00 -2.00 2.94 2.94 6.46 6.46 15.78 15.78 17.07 17.07
8 -1.84 -1.84 1.91 1.91 10.09 10.09 10.74 10.74 16.42 16.42
3 additional processes aborted (not shown)
**********************************END OF LOG FILE************************************
and in the mpi.out:
lib-4091 : UNRECOVERABLE library error
A WRITE operation was attempted on a file with no write permission.
Encountered during a sequential formatted WRITE to unit 7
Fortran unit 7 is connected to a sequential formatted text file: "fort.7"
Current format: (i3,7x,10f7.2/50(10x,10f7.2/))
^
Signal:6 info.si_errno:0(Success) si_code:-6()
[0] func:/opt/psc/ompi/1.1.4/lib/libopal.so.0 [0x2a959ab02b]
*** End of error message ***
It looks to me that somewhere in the GW code, two or more MPI threads was trying to write to file "fort.7", and thus failed. Has anyone else encountered problem like this? Any suggestions would be appreciated.
Best,
Chao Cao
Quantum Theory Project,
University of Florida
Gainesville, FL 32608
- [BUG?] MPI Abinit 5 cannot calculate GW?, Chao Cao, 05/09/2007
- Re: [abinit-forum] [BUG?] MPI Abinit 5 cannot calculate GW?, Matteo Giantomassi, 05/09/2007
- Re: [abinit-forum] [BUG?] MPI Abinit 5 cannot calculate GW?, Chao Cao, 05/09/2007
- Re: [abinit-forum] [BUG?] MPI Abinit 5 cannot calculate GW?, Matteo Giantomassi, 05/10/2007
- Re: [abinit-forum] [BUG?] MPI Abinit 5 cannot calculate GW?, Chao Cao, 05/11/2007
- Re: [abinit-forum] [BUG?] MPI Abinit 5 cannot calculate GW?, Matteo Giantomassi, 05/15/2007
- Re: [abinit-forum] [BUG?] MPI Abinit 5 cannot calculate GW?, Chao Cao, 05/11/2007
- Re: [abinit-forum] [BUG?] MPI Abinit 5 cannot calculate GW?, Matteo Giantomassi, 05/10/2007
- Re: [abinit-forum] [BUG?] MPI Abinit 5 cannot calculate GW?, Chao Cao, 05/09/2007
- Re: [abinit-forum] [BUG?] MPI Abinit 5 cannot calculate GW?, Matteo Giantomassi, 05/09/2007
Archive powered by MHonArc 2.6.16.