The ABINIT Users Mailing List ( CLOSED )

["Rajdeep Saha" <rsaha@pas.rochester.edu>]

Hi Nico,

Thanks for the reply. I am also using a Intel Fortran Compiler. The log file
looks like this;

  ABINIT

  Give name for formatted input file:
tparal_3.in
  Give name for formatted output file:
tparal_3.out
  Give root name for generic input files:
tparal_3i
  Give root name for generic output files:
tparal_3o
  Give root name for generic temporary files:
tparal_3
-P-0000
-P-0000  isfile : WARNING -
-P-0000   Finds that output file tparal_3.out
-P-0000  already exists.
-P-0000  new name assigned:tparal_3.outA
-P-0000
-P-0000
-P-0000  isfile : WARNING -
-P-0000   Finds that output file tparal_3.outA
-P-0000  already exists.
-P-0000  new name assigned:tparal_3.outB
-P-0000
-P-0000
-P-0000  isfile : WARNING -
-P-0000   Finds that output file tparal_3.outB
-P-0000  already exists.
-P-0000  new name assigned:tparal_3.outC
-P-0000
-P-0000
-P-0000  isfile : WARNING -
-P-0000   Finds that output file tparal_3.outC
-P-0000  already exists.
-P-0000  new name assigned:tparal_3.outD
-P-0000
-P-0000
-P-0000  isfile : WARNING -
-P-0000   Finds that output file tparal_3.outD
-P-0000  already exists.
-P-0000  new name assigned:tparal_3.outE
-P-0000
-P-0000
-P-0000  isfile : WARNING -
-P-0000   Finds that output file tparal_3.outE
-P-0000  already exists.
-P-0000  new name assigned:tparal_3.outF
-P-0000
-P-0000
-P-0000  isfile : WARNING -
-P-0000   Finds that output file tparal_3.outF
-P-0000  already exists.
-P-0000  new name assigned:tparal_3.outG
-P-0000
-P-0003  leave_test : synchronization done...
-P-0002  leave_test : synchronization done...
-P-0000  leave_test : synchronization done...
-P-0001  leave_test : synchronization done...

.Version 5.3.4  of ABINIT
.(MPI version, prepared for a x86_64_linux_intel computer)

.Copyright (C) 1998-2007 ABINIT group .
 ABINIT comes with ABSOLUTELY NO WARRANTY.
 It is free software, and you are welcome to redistribute it
 under certain conditions (GNU General Public License,
 see ~abinit/COPYING or http://www.gnu.org/copyleft/gpl.txt).

 ABINIT is a project of the Universite Catholique de Louvain,
 Corning Inc. and other collaborators, see
~abinit/doc/developers/contributors.txt .
 Please read ~abinit/doc/users/acknowledgments.html for suggested
 acknowledgments of the ABINIT effort.
 For more information, see http://www.abinit.org .

.Starting date : Thu 31 May 2007.

- input  file    -> tparal_3.in
- output file    -> tparal_3.outG
- root for input  files -> tparal_3i
- root for output files -> tparal_3o

 instrng :    32 lines of input have been read

 iofn2 : Please give name of formatted atomic psp file
 iofn2 : for atom type   1 , psp file is
../../../Psps_for_tests/HGH/79au.11.hgh
  read the values zionpsp= 11.0 , pspcod=   3 , lmax=   2

 iofn2 : deduce mpsang  =   3, n1xccc  =   0.
-P-0000  leave_test : synchronization done...

 invars1m : enter jdtset=     0

 ingeo : use angdeg to generate rprim.
 ingeo : takes atomic coordinates from input array xangst

 symanal : COMMENT -
  The Bravais lattice determined only from the primitive
  vectors, bravais(1)=  7, is more symmetric
  than the real one, iholohedry=  5, obtained by taking into
  account the atomic positions.
 symspgr : the symmetry operation no.   1 is the identity
 symspgr : the symmetry operation no.   2 is an inversion
 symplanes : the symmetry operation no.   3 is a mirror plane
 symaxes : the symmetry operation no.   4 is a 2-axis
 symaxes : the symmetry operation no.   5 is a 3-axis
 symspgr : the symmetry operation no.   6 is a -3 axis
 symplanes : the symmetry operation no.   7 is a mirror plane
 symaxes : the symmetry operation no.   8 is a 2-axis
 symaxes : the symmetry operation no.   9 is a 3-axis
 symspgr : the symmetry operation no.  10 is a -3 axis
 symplanes : the symmetry operation no.  11 is a mirror plane
 symaxes : the symmetry operation no.  12 is a 2-axis
 symspgr : the symmetry operation no.  13 is a pure translation
 symspgr : the symmetry operation no.  14 is an inversforrtl: severe
(174): SIGSEGV, segmentation fault occurred
Image              PC                Routine            Line        Source
libc.so.6          0000002A95CE27E4  Unknown               Unknown  Unknown
libc.so.6          0000002A95CE4019  Unknown               Unknown  Unknown
abinip             0000000000E931D7  Unknown               Unknown  Unknown
abinip             0000000000EA5C9F  Unknown               Unknown  Unknown
abinip             0000000000EA5C43  Unknown               Unknown  Unknown
abinip             0000000000C6E563  Unknown               Unknown  Unknown
abinip             000000000094E8B0  Unknown               Unknown  Unknown
abinip             0000000000915830  Unknown               Unknown  Unknown
abinip             000000000040858C  Unknown               Unknown  Unknown
abinip             0000000000405A3A  Unknown               Unknown  Unknown
libc.so.6          0000002A95C95E5D  Unknown               Unknown  Unknown
abinip             000000000040596A  Unknown               Unknown  Unknown
forrtl: severe (174): SIGSEGV, segmentation fault occurred
Image              PC                Routine            Line        Source
libc.so.6          0000002A95CE27E4  Unknown               Unknown  Unknown
libc.so.6          0000002A95CE4019  Unknown               Unknown  Unknown
abinip             0000000000E931D7  Unknown               Unknown  Unknown
abinip             0000000000EA5C9F  Unknown               Unknown  Unknown
abinip             0000000000EA5C43  Unknown               Unknown  Unknown
abinip             0000000000C6E563  Unknown               Unknown  Unknown
abinip             000000000094E8B0  Unknown               Unknown  Unknown
abinip             0000000000915830  Unknown               Unknown  Unknown
abinip             000000000040858C  Unknown               Unknown  Unknown
abinip             0000000000405A3A  Unknown               Unknown  Unknown
libc.so.6          0000002A95C95E5D  Unknown               Unknown  Unknown
abinip             000000000040596A  Unknown               Unknown  Unknown
ion
 symplanes : the symmetry operation no.  15 is a secondary m plane
 symaxes : the symmetry operation no.  16 is a 2-axis
 symaxes : the symmetry operation no.  17 is a 3-axis
 symspgr : the symmetry operation no.  18 is a -3 axis
 symplanes : the symmetry operation no.  19 is a mirror plane
 symaxes : the symmetry operation no.  20 is a 2-axis
 symaxes : the symmetry operation no.  21 is a 3-axis
 symspgr : the symmetry operation no.  22 is a -3 axis
 symplanes : the symmetry operation no.  23 is a secondary m plane
 symaxes : the symmetry operation no.  24 is a 2-axis
 symspgr : the symmetry operation no.  25 is a pure translation
 symspgr : the symmetry operation no.  26 is an inversion
 symplanes : the symmetry operation no.  27 is a secondary m plane
 symaxes : the symmetry operation no.  28 is a 2-axis
 symaxes : the symmetry operation no.  29 is a 3, 3_1 or 3_2 axis
 symspgr : the symmetry operation no.  30 is a -3 axis
 symplanes : the symmetry operation no.  31 is a secondary m plane
 symaxes : the symmetry operation no.  32 is a 2-axis
 symaxes : the symmetry operation no.  33 is a 3, 3_1 or 3_2 axis
 symspgr : the symmetry operation no.  34 is a -3 axis
 symplanes : the symmetry operation no.  35 is a secondary m plane
 symaxes : the symmetry operation no.  36 is a 2-axis
 symspgr : the symmetry operation no.  37 is a pure translation
 symspgr : the symmetry operation no.  38 is an inversion
 symplanes : the symmetry operation no.  39 is a mirror plane
 symaxes : the symmetry operation no.  40 is a 2-axis
 symaxes : the symmetry operation no.  41 is a 3-axis
 symspgr : the symmetry operation no.  42 is a -3 axis
 symplanes : the symmetry operation no.  43 is a secondary m plane
 symaxes : the symmetry operation no.  44 is a 2-axis
 symaxes : the symmetry operation no.  45 is a 3-axis
 symspgr : the symmetry operation no.  46 is a -3 axis
 symplanes : the symmetry operation no.  47 is a secondary m plane
 symaxes : the symmetry operation no.  48 is a 2-axis

 symspgr : WARNING -
  Could not find the space group.
  This often happens when the user selects a restricted set of symmetries
  in the input file, instead of letting the code automatically find
symmetries.
 inkpts: Sum of    1 k point weights is    1.000000

 inkpts : istwfk preprocessed, gives following first values (max. 6): 2
  distrb2: enter
  mpi_enreg%parareel=           0
  mpi_enreg%paralbd=           2
  mpi_enreg%paral_compil_respfn=           0

 distrb2: WARNING -
  nproc=   4 > nkpt*nbdblock*nsppol   2
  The number of processors is larger than nkpt*nbdblock*nsppol. This is a
waste.
  distrb2: exit
forrtl: severe (174): SIGSEGV, segmentation fault occurred
Image              PC                Routine            Line        Source
libc.so.6          0000002A95CE27E4  Unknown               Unknown  Unknown
libc.so.6          0000002A95CE4019  Unknown               Unknown  Unknown
abinip             0000000000E931D7  Unknown               Unknown  Unknown
abinip             0000000000EA5C9F  Unknown               Unknown  Unknown
abinip             0000000000EA5C43  Unknown               Unknown  Unknown
abinip             0000000000C6E563  Unknown               Unknown  Unknown
abinip             000000000094E8B0  Unknown               Unknown  Unknown
abinip             0000000000915830  Unknown               Unknown  Unknown
abinip             000000000040858C  Unknown               Unknown  Unknown
abinip             0000000000405A3A  Unknown               Unknown  Unknown
libc.so.6          0000002A95C95E5D  Unknown               Unknown  Unknown
abinip             000000000040596A  Unknown               Unknown  Unknown
forrtl: severe (174): SIGSEGV, segmentation fault occurred
Image              PC                Routine            Line        Source
libc.so.6          0000002A95CE27E4  Unknown               Unknown  Unknown
libc.so.6          0000002A95CE4019  Unknown               Unknown  Unknown
abinip             0000000000E931D7  Unknown               Unknown  Unknown
abinip             0000000000EA5C9F  Unknown               Unknown  Unknown
abinip             0000000000EA5C43  Unknown               Unknown  Unknown
abinip             0000000000C6E563  Unknown               Unknown  Unknown
abinip             000000000094E8B0  Unknown               Unknown  Unknown
abinip             0000000000915830  Unknown               Unknown  Unknown
abinip             000000000040858C  Unknown               Unknown  Unknown
abinip             0000000000405A3A  Unknown               Unknown  Unknown
libc.so.6          0000002A95C95E5D  Unknown               Unknown  Unknown
abinip             000000000040596A  Unknown               Unknown  Unknown

Thanks a lot for your help. I am using also using mpich2. Thanks a lot for
your help.

Rajdeep.