The ABINIT Users Mailing List ( CLOSED )

[Jason Giangrande <JGiangrande@clarku.edu>]

Hello,

 

I’m trying to compile Abinit-5.4.4 on a Linux cluster using PGI version 6.0.  The compile itself goes fine but when I try to run the tests afterwards I get a floating point exception error on some tests and a segmentation fault error on others.  Here’s an example of the output I receive when running make test1

 

>echo "Running built-in test 1"

>Running built-in test 1

>cd tests ; /usr/bin/perl .././tests/Scripts/run-basic-tests.pl built-in 1 /home/mconlon/abinit-5.4.4

>sh: line 1: 15274 Floating point exception../../../src/main/abinis <test1.files >test1.log

> 

> Status file, with repetition rate  99, status number    10

> 

>  Level abinit         : call driver

>  Level driver         : enter

 

Also on some of these tests I get segmentation faults.

 

>echo "Running built-in test 5"

>Running built-in test 5

>cd tests ; /usr/bin/perl .././tests/Scripts/run-basic-tests.pl built-in 5 /home/mconlon/abinit-5.4.4

>sh: line 1: 15429 Segmentation fault      ../../../src/main/abinis <test5.files >test5.log

> 

> Status file, with repetition rate  49, status number    10

> 

>  Level abinit         : call driver

>  Level driver         : enter

 

If I set the enable_tricks option in the hostname.ac file equal to “no“ the floating point errors go away and the seg faults decrease but then I get memory deallocation errors similar to the one below.

 

>echo "Running built-in test 1"

>Running built-in test 1

>cd tests ; /usr/bin/perl .././tests/Scripts/run-basic-tests.pl built-in 1 /home/mconlon/abinit-5.4.4

>0: DEALLOCATE: memory at 0x26106c0 not allocated

 

Something seems to be wrong with the compiler or more likely the way I am doing the compiling.  Does anyone know what these errors actually pertain to and how I could go about resolving them?

 

Thanks.

-Jason Giangrande