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Re: [abinit-forum] band2eps trouble and general phonon questions


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  • From: PGanesh <pganesh@ciw.edu>
  • To: forum@abinit.org
  • Subject: Re: [abinit-forum] band2eps trouble and general phonon questions
  • Date: Tue, 11 Dec 2007 14:13:38 -0400

Dear All,

When I use the band2eps program, then in the .eps file I find that there are "*****" entries, so that the bands are not really getting plotted. Here are a few lines in the section "write bands" of the .eps file generated by "band2eps" program:

n 2400 **** m
3840 **** l gs
0.000 0.000 0.000 srgb s gr

I wonder what I am doing wrong. I am interpolating between Gamma (0,0,0) and X (0.5,0,0) with 5 intermediate points.

Thanks,
P. Ganesh


Josef W. Zwanziger wrote:
I think the problem is that your entries in the color tables don't also have ten inputs. The "red" line should have 10 0's and 1's, same for green, same for blue, so the program knows how to color the contribution from each atom.

As to assignments, the three modes that go to zero frequency at Gamma are the acoustic modes (of course) and as for the rest, you might assign them as transverse or longitudinal based on their degeneracy pattern at Gamma. That depends I believe on the symmetry of your crystal, though.


Josef W. Zwanziger
Prof. of Chemistry and Canada Research Chair in NMR Studies of Materials
Director, Atlantic Region Magnetic Resonance Centre
Dalhousie University
Halifax, NS B3H 4J3
Canada

tel: 902.494.1960 net: jzwanzig@dal.ca
fax: 902.494.1867 web: http://jwz.chem.dal.ca


PGanesh wrote:
Dear All,

I had previously sent an email about having trouble with the 'band2eps' program and didn't receive any response. So here is a detailed email to make thing more clear.

I have a 10 atom primitive cell. In the input file, trf2_6.in
(same as in tutorial rf2) if I put '10' for number of atoms per unit cell I get a Fortran error. I am cut pasting the contents of trf2_6.in
below.
trf2_6.in:
#Input file for 'band2eps.' This data layout must be used, line-by-line.
#number of atoms in a cell :
10
#minimum value, maximum value and number of tics of the vertical axe :
-10.0 400.0 8
#Units : 1 for cm-1, 2 for THz :
1
#Number of lines :
9
#Description of the points in q space :
gamma X M Y gamma Z R A B Z
#Number of q points for each line :
5 5 5 5 5 5 5 5 5
#Scale factor for each line :
1.06066017 0.35355339 1.0 0.86602540 0.86602540 0.5 0.70710678 1.0 1.0
#COLOR DEFINITION :
#put 1 in place of the atom you want to be colored in
#red
0 0
#green
0 0
#blue
0 0

The Fortran error is:
Opening file trf2_6.out.eps
Opening file PST_band2eps.freq
Opening file trf2_6.in
forrtl: severe (59): list-directed I/O syntax error, unit 21, file trf2_6.in


1) Can someone tell me what mistake I am making? I have nph1l=46 in input for "anaddb".

2) Also, how to set the colors ? Do they color the modes according to the contribution from the different atoms?

3) In the list of phonon output file I get a list of 3N =30 modes. I guess the first three should be accoustic and others optic. Which are the transverse and longitudinal modes ? Is it like for every triad the first 2 are transvers and the third is longitudinal?

Thanks,
Ganesh





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