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parallel abinit compile problem


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  • From: "Jun Dai" <jdai3@mail.ustc.edu.cn>
  • To: forum@abinit.org
  • Subject: parallel abinit compile problem
  • Date: Tue, 18 Mar 2008 02:07:14 +0800

Dear abinit users,
when i try to compile abinit in the parallel mode, using configure
--with-mpi-prefix='$MPICHINSTALL', then type make, i get the following error,
the
library setting seems to be ok in my ~/.bashrc file, and the compiler i use
is ifc
9.0, mpi enviroment is mpich. the error seems to be from the setting of mpi
library, but i really do not know how to solve this problem, any suggestion
will
be appreciate very much, thanks in advance.



############################
/local/jdai/soft/mpich-1.2.5/bin/mpif90 -extend_source -vec-report0
-static-libcxa -o abinip abinip-abinit.o ../../src/21drive/lib21drive.a
../../src/21paral_md/lib21paral_mdp.a ../../src/21rdm/lib21rdm.a
../../src/18seqpar/lib18seqparp.a ../../src/17suscep/lib17suscep.a
../../src/16response/lib16response.a ../../src/16geomoptim/lib16geomoptim.a
../../src/15gw/lib15gw.a ../../src/15common/lib15common.a
../../src/15rsprc/lib15rsprc.a ../../src/14occeig/lib14occeig.a
../../src/14iowfdenpot/lib14iowfdenpot.a ../../src/14wvl_wfs/lib14wvl_wfs.a
../../src/14wfs/lib14wfs.a ../../src/14poisson/lib14poissonp.a
../../src/13ionetcdf/lib13ionetcdf.a ../../src/13iovars/lib13iovars.a
../../src/13io_mpi/lib13io_mpip.a ../../src/13paw/lib13paw.a
../../src/13recipspace/lib13recipspace.a ../../src/13xc/lib13xc.a
../../src/13xml/lib13xml.a ../../src/13nonlocal/lib13nonlocal.a
../../src/12nlstrain/lib12nlstrain.a ../../src/12ffts/lib12ffts.a
../../src/13psp/lib13psp.a ../../src/12geometry/lib12geometry.a
../../src/12parser/lib12parser.a ../../src/12spacepar/lib12spacepar.a
../../src/11contract/lib11contract.a ../../src/11util/lib11util.a
../../src/01manage_mpi/lib01manage_mpip.a ../../src/00basis/lib00basis.a
../../src/lib01cg/liblib01cg.a ../../src/lib01hidempi/liblib01hidempip.a
../../src/lib01fftnew/liblib01fftnewp.a ../../src/defs/libdefs.a
-L../../lib/numeric -lnumeric -L../../lib/numericf90 -lnumericf90
-L/local/jdai/soft/abinit-5.4.4/lib/linalg -llinalg
../../src/18seqpar/lib18seqparp.a(lib18seqparp_a-cgwf_htor.o)(.text+0x3f37):
In
function `cgwf_htor_':
: undefined reference to `mpi_wtime_'
../../src/18seqpar/lib18seqparp.a(lib18seqparp_a-cgwf_htor.o)(.text+0x44af):
In
function `cgwf_htor_':
: undefined reference to `mpi_wtime_'
../../src/18seqpar/lib18seqparp.a(lib18seqparp_a-cgwf_htor.o)(.text+0x4948):
In
function `cgwf_htor_':
: undefined reference to `mpi_wtime_'
../../src/18seqpar/lib18seqparp.a(lib18seqparp_a-cgwf_htor.o)(.text+0x4971):
In
function `cgwf_htor_':
: undefined reference to `mpi_wtime_'
../../src/18seqpar/lib18seqparp.a(lib18seqparp_a-cgwf_htor.o)(.text+0x4da2):
In
function `cgwf_htor_':
: undefined reference to `mpi_wtime_'
../../src/18seqpar/lib18seqparp.a(lib18seqparp_a-cgwf_htor.o)(.text+0x86df):
more
undefined references to `mpi_wtime_' follow
make[3]: *** [abinip] Error 1
make[3]: Leaving directory `/local/jdai/soft/abinit-5.4.4/src/main'
make[2]: *** [all-recursive] Error 1
make[2]: Leaving directory `/local/jdai/soft/abinit-5.4.4/src'
make[1]: *** [all-recursive] Error 1
make[1]: Leaving directory `/local/jdai/soft/abinit-5.4.4'
make: *** [all] Error 2




  • parallel abinit compile problem, Jun Dai, 03/17/2008

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