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- From: <jimprtlnd01@gmail.com>
- To: anglade@gmail.com, forum@abinit.org
- Subject: Re: Re: [abinit-forum] Haulting of the run
- Date: Fri, 3 Oct 2008 23:38:07 +0200 (CEST)
THIS IS ALMOST EXACTLY the behavior I'm seeing. Please continue to look into
this. I get constant hangs (where it stops updating the log files) and
SEGMENTATION FAULTS galore.
I am running on a 8-core Mac Pro. I have tried gfortran, and intel
compilers.
I have tried 5.4.4, 5.5.4, and 5.6.2. I have tried multiple input files.
All exhibit similar behavior. Hang or segmentation fault. Usually if I let
the hang run for a couple of hours, it eventually crashes with a seg fault.
I can sometimes get it through Broyden Step 0, but only by changing my input
file, lowering ecut to 20 or something like that.
Please please let me know what I can do to help track this down. I'm running
very similar molecules, like Fe3O4, Cu2O.
I will include an input file for completeness. I can provide any more
information, and will be HAPPY to work with someone to track this down and get
it fixed. I am an experienced software developer, so I think I can be a lot
of
help with running tests and tracking this bug.
It's preventing me from using ABINIT to accomplish anything.
One more thing. In this particular instance, a dilatmx of 1.2 caused it not
to
crash. But, instead it exited with an error saying it needed at least dilatms
of 1.58. So you see my dilemma...
******* Input file
kptopt 1 # Automatic generation of k points, taking
# into account the symmetry
tolvrs 1.0d-12 # SCF stopping criterion
iscf 5 # Self-consistent calculation, using algorithm 5
#######################################################################
#Common input variables
chkprim 0
#Definition of the atom types
acell 3*4.252 angstrom
ntypat 2
znucl 8 29
natom 9
typat 1 2 2 1 1 2 1 2 1
xangst 1.265 1.054 -0.917
2.604 0.846 0.438
-0.211 2.047 -0.208
3.944 0.638 1.793
-1.69 3.043 0.503
0.658 -0.672 -1.487
0.05 -2.403 -2.059
2.005 1.989 -2.403
2.752 2.932 -3.903
#Gives the number of band, explicitely (do not take the default)
nband 72
# iprcel 142
#Exchange-correlation functional
ixc 1 # LDA Teter Pade parametrization
#Definition of the planewave basis set
nstep 60
ecut 70.0 # Maximal kinetic energy cut-off, in Hartree
optcell 2
ecutsm 0.5
ionmov 2
ntime 80 # number of steps of calculations IF ionmove = 1 or 2
# toldff 5.0d-5
# toldfe 1.0d-4
# occopt 3 # **** may need to change for metals
tolmxf 5.0d-4 #**** this is to speed up geometry optimization
dilatmx 1.8
strprecon 0.1
diemac 9.0
- [abinit-forum] Haulting of the run, sara yazdani, 10/03/2008
- Re: [abinit-forum] Haulting of the run, Anglade Pierre-Matthieu, 10/03/2008
- Re: [abinit-forum] Haulting of the run, sara yazdani, 10/03/2008
- Re: [abinit-forum] Haulting of the run, Anglade Pierre-Matthieu, 10/03/2008
- Re: Re: [abinit-forum] Haulting of the run, jimprtlnd01, 10/03/2008
- Re: [abinit-forum] Haulting of the run, sara yazdani, 10/04/2008
- Re: [abinit-forum] Haulting of the run, Anglade Pierre-Matthieu, 10/04/2008
- Re: Re: [abinit-forum] Haulting of the run, jimprtlnd01, 10/06/2008
- Re: Re: [abinit-forum] Haulting of the run, Anglade Pierre-Matthieu, 10/06/2008
- Re: Re: [abinit-forum] Haulting of the run, jimprtlnd01, 10/06/2008
- Re: [abinit-forum] Haulting of the run, Anglade Pierre-Matthieu, 10/04/2008
- Re: [abinit-forum] Haulting of the run, sara yazdani, 10/04/2008
- Re: [abinit-forum] Haulting of the run, sara yazdani, 10/03/2008
- Re: [abinit-forum] Haulting of the run, Anglade Pierre-Matthieu, 10/03/2008
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