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- From: James Johns <jej7x@xenon.cchem.berkeley.edu>
- To: forum@abinit.org
- Subject: [abinit-forum] Compiling abinip using mpich on Suse10.1
- Date: Sun, 15 Feb 2009 22:43:38 -0800 (PST)
Hi,
I'm the relatively inexperienced system admin for a few computers in my experimental lab. I'm using a SMP 4 intel xenon processor SUSE10.1 machine, and have compiled and run abinit quite sucessfully, but only in a serial capacity. I'd like to use the larger power of my machine by using the parallel version of the code. To that end, I installed the mpich package. That, however, did not install a header file mpi.h which the tutorial on abinip said to look for. I then installed the mpich development package/kit/thingy from SUSE. This has the mpich header, as well as a several libraries for the fortran compiler. First question, it is unclear from the tutorial if I should still use the configuration flag FC=ifort (I had used the intel fortran compiler to make the serial version). Also, using the default configuration script, it does not detect a native mpi support. If I use the command configure --with-mpi-prefix=/opt/mpich/include (this is where mpi.h is) it also can't find anything. If I use the directory /opt/mpich/ch-p4 it can at least find that there is a general parallel environment, but does not recognize it as mpi. This also does not put a copy of abinip in the ~abinit/src/main directory. Attempting to run make and then make install or make multi and make install both give errors. In the tutorial, it says to replace a directory in the line with a directory you have already written down, but early in the same paragraph it says to take note of the location of the mpi.h file, the name and location of the MPI library file ending in .a (which of the many library files I'm not sure) and the dependencies of the MPI Library. The tutorial I'm reading from is
http://www.abinit.org/Infos_v5.5/tutorial/lesson_parallelism.html
I know discussions of compilation of abinit, and specifically how to compile and use the parallel version have come up before, but I have 4 years of this forum saved on my hard drive, and searching for parallel or compilation problems yields far to many results. If anyone has any clarification, that would be greatly appreciated. Thanks,
James Johns
UC Berkeley
- [abinit-forum] Compiling abinip using mpich on Suse10.1, James Johns, 02/16/2009
- Re: [abinit-forum] Compiling abinip using mpich on Suse10.1, Alain Jacques, 02/16/2009
- Re: [abinit-forum] Compiling abinip using mpich on Suse10.1, James Johns, 02/17/2009
- Re: [abinit-forum] Compiling abinip using mpich on Suse10.1, Alain Jacques, 02/17/2009
- Re: [abinit-forum] Compiling abinip using mpich on Suse10.1, James Johns, 02/19/2009
- Re: [abinit-forum] Compiling abinip using mpich on Suse10.1, Alain Jacques, 02/20/2009
- Re: [abinit-forum] Compiling abinip using mpich on Suse10.1, James Johns, 02/19/2009
- Re: [abinit-forum] Compiling abinip using mpich on Suse10.1, Alain Jacques, 02/17/2009
- Re: [abinit-forum] Compiling abinip using mpich on Suse10.1, James Johns, 02/17/2009
- Re: [abinit-forum] Compiling abinip using mpich on Suse10.1, Alain Jacques, 02/16/2009
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