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Re: [abinit-forum] What is the meaning of error message "increase limit on available memory"


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  • From: YuichiroKuroki <kuroki@vos.nagaokaut.ac.jp>
  • To: forum@abinit.org
  • Subject: Re: [abinit-forum] What is the meaning of error message "increase limit on available memory"
  • Date: Thu, 18 Jun 2009 20:16:24 +0900

Dear. Matteo Giantomassi,

> Could you provide the input file of the calculation?

Thank you for your kind comment.

I checked the test/v1/t40.in (Diamond with 1-vacancy) as similar case
of my system at first. But I didn't understand the format of the parameters objan, objaat, objar, objatr, vacnum and vaclst.
So I simply aligned 64 atoms positions.

Resulting, this job took a long time to converge, and then I stopped.
Now, I'm trying to run scf calculation at only Gamma point using k-point parameter in test/v1/t40.in file. It uses about 8GB memory.

Would you please point out the problems in my input file?

Yuichiro KUROKI

======================================================================
# Cu16Al16S32 scf and dos caluclation
#
# Computation of the DOS.
# First, a SCF calculation, structual optimization and then a DOS calculation.

ndtset 2

#First Dataset ######## usual self-consistent calculation ########
kptopt1 1
nshiftk1 4
shiftk1 0.5 0.5 0.5 # These shifts will be the same for all grids
0.5 0.0 0.0
0.0 0.5 0.0
0.0 0.0 0.5
ngkpt1 2 2 2
prtden1 1 # Print the density, for use by dataset 2
toldfe1 1.0d-10

#Second Dataset ######## partial DOS calculation ########
iscf2 -3
getden2 1
getwfk2 1
prtdos2 2
dosdeltae2 0.001
ecutsm2 0.5
natsph2 1
#iatsph2 2
#ratsph2 2.76 # This has been ajusted to give approximately 4 valence electrons per atom
kptopt2 1
ngkpt2 4 4 4 # This is not sufficient for a nice DOS.
# One should use ngkpt2 8 8 8
enunit2 1 # Will output the eigenenergies in eV
tolwfr2 1.0d-16
shiftk2 0.0 0.0 0.0 # Use a non-shifted k point grid, giving a much
0.0 0.5 0.5 # better-looking DOS graph than the shifted one,
0.5 0.0 0.5 # because tetrahedra with all four same energies
0.5 0.5 0.0 # are avoided

!Common data

acell 10.634626990 10.634626990 10.396555215238 angstrom
angdeg 90 90 90

#rprim 1.00000000000000000000000000000000 0.00000000000000000000000000000000 0.00000000000000000000000000000000
# 0.00000000000000000000000000000000 1.00000000000000000000000000000000 0.00000000000000000000000000000000
# 0.25545841370681364649856075930371 0.25545841370681364649856075930371 0.50000000000000000000000000000000

chkprim 0
#ionmov 3
#optcell 2
#ecutsm 0.5
#spgroup 122
#brvltt -1
diemac 5.d0
ecut 45
natom 64
nband 256
nstep 50
ntypat 3
occopt 1
mkmem 0
typat 16*1 16*2 32*3

xred 0.000000000000 0.000000000000 0.000000000000
0.000000000000 0.000000000000 0.500000000000
.
. 64 atoms with chalcopyrite structure
.
0.687500000000 0.432500000000 0.875000000000
0.687500000000 0.932500000000 0.375000000000
0.687500000000 0.932500000000 0.875000000000

znucl 29 13 16

=================================================================





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