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FW: [abinit-forum] abinit doesn't recognize cinnabar spacegroup!!!!!!!!!!!


Chronological Thread 
  • From: Abedalhasan Breidi <a.breidi@hotmail.com>
  • To: abinit forum <forum@abinit.org>
  • Subject: FW: [abinit-forum] abinit doesn't recognize cinnabar spacegroup!!!!!!!!!!!
  • Date: Fri, 18 Sep 2009 12:21:09 +0300
  • Importance: Normal



--------------------------------------------------------------------------------------------------
 Abedalhasan BREIDI
 PhD student in Condensed Matter
 Université de Metz - Institut de Physique
 LABORATOIRE DE PHYSIQUE DES MILIEUX DENSES
 Adresse:1 Boulevard Arago- BP 87811
 57078 METZ CEDEX 3 - FRANCE
 http://www.univ-metz.fr/recherche/labos/lpmd/
 Abedalhasan.breidi@univ-metz.fr
----------------------------------------------------------------------------------------------------





Date: Fri, 18 Sep 2009 11:04:13 +0200
From: emmanuel.arras@cea.fr
To: a.breidi@hotmail.com
Subject: Re: [abinit-forum] abinit doesn't recognize cinnabar spacegroup!!!!!!!!!!!

Can you post this discussion on the forum? That could help others in the same kind of situation.

Regards

Abedalhasan Breidi a écrit :
yes
thank you

--------------------------------------------------------------------------------------------------
 Abedalhasan BREIDI
 PhD student in Condensed Matter
 Université de Metz - Institut de Physique
 LABORATOIRE DE PHYSIQUE DES MILIEUX DENSES
 Adresse:1 Boulevard Arago- BP 87811
 57078 METZ CEDEX 3 - FRANCE
 http://www.univ-metz.fr/recherche/labos/lpmd/
 Abedalhasan.breidi@univ-metz.fr
----------------------------------------------------------------------------------------------------


All right. So it seems that 0 0 0.5 shift gives converged results with less kpoints than 0.5 0.5 0.5 shift. Does it not?
Indeed 30 kpt seems to be ok with 0 0 0.5 shift when 33 kpt with 0.5 0.5 0.5 shift gives worse result.
Moreover, symetries allow denser k mesh with less points with 0 0 0.5 shift.
Is it ok for you?



Date: Thu, 17 Sep 2009 14:30:56 +0200
From: emmanuel.arras@cea.fr
To: a.breidi@hotmail.com
Subject: Re: [abinit-forum] abinit doesn't recognize cinnabar spacegroup!!!!!!!!!!!

all right, this is ok.
Can you further try
10 10 5
12 12 6
and 1 shift 0 0 0.5
to complete your graph?



Abedalhasan Breidi a écrit :
I tried it the way you told me, for both shifts keeping the same sampling. The behavior of the energy still suspicious.
see attached the figure and data file.

Best Wishes

--------------------------------------------------------------------------------------------------
 Abedalhasan BREIDI
 PhD student in Condensed Matter
 Université de Metz - Institut de Physique
 LABORATOIRE DE PHYSIQUE DES MILIEUX DENSES
 Adresse:1 Boulevard Arago- BP 87811
 57078 METZ CEDEX 3 - FRANCE
 http://www.univ-metz.fr/recherche/labos/lpmd/
 Abedalhasan.breidi@univ-metz.fr
----------------------------------------------------------------------------------------------------





Date: Thu, 17 Sep 2009 09:58:49 +0200
From: emmanuel.arras@cea.fr
To: a.breidi@hotmail.com
Subject: Re: [abinit-forum] abinit doesn't recognize cinnabar spacegroup!!!!!!!!!!!

I'm glad it worked.
You can use whatever shift you want, the thing is it should converge faster with 0 0 0.5.
In your case, I'd say the problem is that you have the same sampling along all directions, whereas the c axis is twice as big as a and b. Personnally, I'd try convergence with :
2 2 1
4 4 2
6 6 3
8 8 4
and 1 shift 0 0 0.5

you can then compare the same sampling with shift 0.5 0.5 0.5. I'd be interested in the results.
Good luck.





Abedalhasan Breidi a écrit :
Hello!!
much appreciated.
I've done just what you indicated and everything went O.K.
by the way is it O.K to use for cinnabar (Hex.) this sampling: nshiftk=1 and shiftk 0.5 0.5 0.5
or one is obliged to use this: nshiftk= 1 and shiftk 0.0 0.0 0.5  ??   
please see enclosed the relevant attachment.

thanks in advance
--------------------------------------------------------------------------------------------------
 Abedalhasan BREIDI
 PhD student in Condensed Matter
 Université de Metz - Institut de Physique
 LABORATOIRE DE PHYSIQUE DES MILIEUX DENSES
 Adresse:1 Boulevard Arago- BP 87811
 57078 METZ CEDEX 3 - FRANCE
 http://www.univ-metz.fr/recherche/labos/lpmd/
 Abedalhasan.breidi@univ-metz.fr
----------------------------------------------------------------------------------------------------





Date: Wed, 16 Sep 2009 18:53:19 +0200
From: emmanuel.arras@cea.fr
To: forum@abinit.org
Subject: Re: [abinit-forum] abinit doesn't recognize cinnabar spacegroup!!!!!!!!!!!

Hi,
First, you cannot use both angdeg and rprim, so you sould get rid of the second.
Then, the last digits of the third column of your reduded coordinates ar wrong. You should increase the precision (number of digits) : 0.66666667 -> 0.6666666667 ; 0.33333334 -> 0.3333333333 ; ...

Regards


Abedalhasan Breidi a écrit :
COL118-W2113845ABF09899EA72EFC91E20@phx.gbl"> Dear abinit user,
Aiming to establish the phonon dispersion curves of ZnSe in cinnabar structure. First I tried to make the K-points convergence test.
But surprisingly, the code couldn't recognize the cinnabar spacegroup and instead he gives in the output file :
 space group P1 (#  1); Bravais aP (primitive triclinic)  
while in fact the cinnabar is of Space Group: P3221 and No: 154 
I am quiet a beginner in using abinit, I welcome any suggestions  to correct my input file (especially the quick ones!!!!)
The outputfile is attached,  please  see down my input file:
 
#  Crstalline ZnSe_Cinnabar
# Convergence of the total energy w.r.t the number of Kpts.
 ndtset 4

#Definition of the unit cell
acell  7.11395  7.11395  16.68497
angdeg 90.00 90.00 120.00
rprim   0.86603  0.00000  0.00000
           -0.50000  1.00000  0.00000
            0.00000  0.00000  1.00000
#Definition of the atom types
ntypat 2                                                                      
znucl 30 34                                                                    
#Definition of the atoms
natom 6                                                       
typat 1 1 1 2 2 2                                                 
xred
   0.47925993   0.00000000   0.66666667
   0.00000000   0.47925993   0.33333334
   0.52074007   0.52074007   0.00000000
   0.48827668   0.00000000   0.16666667
   0.00000000   0.48827668   0.83333334
   0.51172332   0.51172332   0.50000000
#Definition of the planewave basis set
ecut    6.0                                                          
#Deftion of the k-point grids
kptopt 1                                                                    
nshiftk 1
shiftk 0.0 0.0 0.5                                                  
ngkpt1  2 2 2                                            
ngkpt2  4 4 4
ngkpt3  6 6 6
ngkpt4  8 8 8

getwfk -1                                                               
#Definition of the SCF procedure
nstep 40                                            
toldfe 1.0d-6


--------------------------------------------------------------------------------------------------
 Abedalhasan BREIDI
 PhD student in Condensed Matter
 Université de Metz - Institut de Physique
 LABORATOIRE DE PHYSIQUE DES MILIEUX DENSES
 Adresse:1 Boulevard Arago- BP 87811
 57078 METZ CEDEX 3 - FRANCE
 http://www.univ-metz.fr/recherche/labos/lpmd/
 Abedalhasan.breidi@univ-metz.fr
----------------------------------------------------------------------------------------------------




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SP2M / INAC
CEA Grenoble
tel : 00 33 (0)4 387 86862


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SP2M / INAC
CEA Grenoble
tel : 00 33 (0)4 387 86862


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SP2M / INAC
CEA Grenoble
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