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- From: Alain Jacques <ajs.jacques@gmail.com>
- To: forum@abinit.org
- Subject: Re: [abinit-forum] xred
- Date: Sat, 28 Nov 2009 13:49:43 +0100
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Hello Sanjeev Sanjeev Kumar Gupta wrote: 9c021210911280433n7be0acbdi4473cd27eecbeab1@mail.gmail.com" type="cite">Thank You very much sir for kind help. .cif files are crystallographic information files as described in http://www.iucr.org/resources/cif - the workhorse of all crystallographers. To answer your 2 questions, here is a short example - the cif file of the scandium hexagonal crystal adapted from Wyckoff: #------------------------------------------------------------------------------ #$Date: 2008-03-10 08:25:41 +0000 (Mon, 10 Mar 2008) $ #$Revision: 255 $ #$URL: svn://cod.ibt.lt/cod/cif/9/9008514.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_9008514 loop_ _publ_author_name 'Wyckoff R W G' _publ_section_title ; Second edition. Interscience Publishers, New York, New York Hexagonal closest packed, hcp, structure ; _journal_name_full 'Crystal Structures' _journal_page_first 7 _journal_page_last 83 _journal_volume 1 _journal_year 1963 _chemical_formula_sum Sc _chemical_name_mineral Scandium _symmetry_space_group_name_H-M 'P 63/m m c' _cell_angle_alpha 90 _cell_angle_beta 90 _cell_angle_gamma 120 _cell_length_a 3.3090 _cell_length_b 3.3090 _cell_length_c 5.2733 _cell_volume 50.004 loop_ _symmetry_equiv_pos_as_xyz x,y,z -x,-x+y,1/2+z x,x-y,1/2-z -x+y,-x,1/2-z x-y,x,1/2+z -y,-x,z y,x,-z y,-x+y,-z -y,x-y,z x-y,-y,1/2+z -x+y,y,1/2-z x,y,1/2-z -x,-y,1/2+z x,x-y,z -x,-x+y,-z x-y,x,-z -x+y,-x,z y,x,1/2+z -y,-x,1/2-z -y,x-y,1/2-z y,-x+y,1/2+z -x+y,y,z x-y,-y,-z -x,-y,-z loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z Sc 0.33333 0.66667 0.25000 #------------------------------------------------------------------------------ so, for 1. ... there are many sources of cif files, free or commercial - have a look on http://www.crystallography.net/ and for 2. ... for the reduced coordinates - look at the end of the file Sc 0.33333 0.66667 0.25000 And if you obtain data in other formats like pdb, there are several converter. Kind regards, Alain 9c021210911280433n7be0acbdi4473cd27eecbeab1@mail.gmail.com" type="cite"> |
- [abinit-forum] xred, Sanjeev Kumar Gupta, 11/28/2009
- Re: [abinit-forum] xred, Josef Zwanziger, 11/28/2009
- Re: [abinit-forum] xred, Sanjeev Kumar Gupta, 11/28/2009
- Re: [abinit-forum] xred, zahra hooshmand, 11/28/2009
- Re: [abinit-forum] xred, Alain Jacques, 11/28/2009
- Re: [abinit-forum] xred, Xenophon Krokidis, 11/28/2009
- Re: [abinit-forum] xred, Josef Zwanziger, 11/28/2009
- Re: [abinit-forum] xred, Sanjeev Kumar Gupta, 11/28/2009
- Re: [abinit-forum] xred, Josef Zwanziger, 11/28/2009
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