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- From: sonu kumar <so9ukumar@gmail.com>
- To: forum@abinit.org
- Subject: [abinit-forum] Compiling AB-INIT 6.0.1?
- Date: Fri, 19 Feb 2010 10:21:46 +0530
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Hi dear all,
I seemed to have compiled the abinit 6.0.1.
But i have few things to ask...
1) I got a warning during "make", which is
mv -f .deps/timeout.Tpo .deps/timeout.Po
/home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -O3 -fschedule-insns2 -march=nocona -mmmx -msse -msse2 -msse3 -mfpmath=sse -g -O3 -fschedule-insns2 -march=nocona -mmmx -msse -msse2 -msse3 -mfpmath=sse -i-static -static-libcxa -o timeout timeout.o
icc: command line warning #10006: ignoring unknown option '-fschedule-insns2'
icc: command line warning #10120: overriding '-marchnocona' with '-msse'
icc: command line warning #10120: overriding '-msse' with '-msse3'
icc: command line warning #10159: invalid argument for option '-m'
icc: command line warning #10006: ignoring unknown option '-fschedule-insns2'
icc: command line warning #10120: overriding '-marchnocona' with '-msse'
icc: command line warning #10120: overriding '-msse' with '-msse3'
icc: command line warning #10159: invalid argument for option '-m'
icc: command line remark #10148: option '-static-libcxa' not supported
is it to be worried about ?
2) Secondly i put the optimisation flag -O2 in <hostname>.ac file for C and C++ compilers, but when i saw in the log file after running an example, i got following:
=== Build Information ===
Version : 6.0.1
Build target : x86_64_linux_intel11.1
Build date : 20100208
=== Compiler Suite ===
C compiler : gnu
CFLAGS : -g -O3 -fschedule-insns2 -march=nocona -mmmx -msse -msse2 -msse3 -mfpmath=sse
C++ compiler : gnu4.3
CXXFLAGS : -g -O3 -fschedule-insns2 -march=nocona -mmmx -msse -msse2 -msse3 -mfpmath=sse
Fortran compiler : intel11.1
FCFLAGS : -g -extend-source -vec-report0
FC_LDFLAGS : -i-static -static-libcxa
=== Optimizations ===
Debug level : yes
Optimization level : standard
Architecture : intel_xeon
=== MPI ===
Parallel build : yes
Parallel I/O : no
=== Linear algebra ===
Library type : mkl
Use ScaLAPACK : yes
=== Plug-ins ===
BigDFT : yes
ETSF I/O : yes
LibXC : yes
FoX : no
NetCDF : yes
Wannier90 : yes
=== Experimental features ===
Bindings : no
Error handlers : no
Exports : no
GW double-precision : yes
Macroave build : yes
+++++++++++++++++++++++
i want to assign -O2 flags to both c and c++. How can i do it?
3) i gota a warning in config.log as follows
conftest -g -extend-source -vec-report0 -i-static -static-libcxa conftest.F90 >&5
ifort: command line remark #10148: option '-static-libcxa' not supported
configure:27054: $? = 0
configure:27276: result: yes
configure:27285: checking whether MPI is usable
configure:27287: result: yes
configure:27329: WARNING: disabling MPI I/O is not recommended
Should one use MPI I/O?
i am attaching config.log file and <hostname>.ac file. Please see it.
With Warm Regards,
Sonu kumar
This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by ABINIT configure 6.0.1, which was generated by GNU Autoconf 2.63. Invocation command line was $ ./configure ## --------- ## ## Platform. ## ## --------- ## hostname = hcg uname -m = x86_64 uname -r = 2.6.27.42-0.1-default uname -s = Linux uname -v = #1 SMP 2010-01-06 16:07:25 +0100 /usr/bin/uname -p = unknown /bin/uname -X = unknown /bin/arch = x86_64 /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = unknown /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/ PATH: /opt/intel/Compiler/11.1/056/bin/intel64 PATH: /opt/intel/Compiler/11.1/059/bin/intel64 PATH: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/ PATH: /opt/intel/Compiler/11.1/056/bin/intel64 PATH: /opt/intel/Compiler/11.1/059/bin/intel64 PATH: /home/hcg/bin PATH: /usr/local/bin PATH: /usr/bin PATH: /bin PATH: /usr/bin/X11 PATH: /usr/X11R6/bin PATH: /usr/games PATH: /usr/lib64/jvm/jre/bin PATH: /usr/lib/mit/bin PATH: /usr/lib/mit/sbin PATH: . PATH: . ## ----------- ## ## Core tests. ## ## ----------- ## configure:2766: checking build system type configure:2784: result: x86_64-unknown-linux-gnu configure:2806: checking host system type configure:2821: result: x86_64-unknown-linux-gnu configure:2843: checking target system type configure:2858: result: x86_64-unknown-linux-gnu configure:2902: checking for a BSD-compatible install configure:2970: result: /usr/bin/install -c configure:2981: checking whether build environment is sane configure:3041: result: yes configure:3182: checking for a thread-safe mkdir -p configure:3221: result: /bin/mkdir -p configure:3234: checking for gawk configure:3250: found /usr/bin/gawk configure:3261: result: gawk configure:3272: checking whether make sets $(MAKE) configure:3294: result: yes configure:3684: checking whether make sets $(MAKE) configure:3706: result: yes configure:3729: checking for a BSD-compatible install configure:3797: result: /usr/bin/install -c configure:3808: checking whether ln -s works configure:3812: result: yes configure:3819: checking for a sed that does not truncate output configure:3885: result: /usr/bin/sed configure:3894: checking for gawk configure:3921: result: gawk configure:3932: checking for grep that handles long lines and -e configure:3992: result: /usr/bin/grep configure:3999: checking for egrep configure:4063: result: /usr/bin/grep -E configure:5132: reading options from ./hcg.ac configure:6212: enabling all plug-ins configure:6216: not activating ETSF_IO_TEST configure:6389: ABINIT version: 6.0.1 configure:6399: M4 010413 - Autoconf 026300 - Automake 011100 - Libtool 020204 configure:6410: reporting user interface changes: configure:6413: * new option --enable-cuda is available configure:6416: * --enable-debug has a new meaning configure:6418: please check that --enable-debug="yes" is OK for you configure:6421: * new option --enable-etsf-io-test is available configure:6424: * --enable-tricks renamed --enable-hints configure:6432: * --enable-etsf-xc renamed --enable-libxc configure:6440: * --enable-mpi has a new meaning configure:6442: please check that --enable-mpi="yes" is OK for you configure:6445: * --enable-mpi-io-buggy renamed --enable-mpi-io-test configure:6453: * --enable-optlevel renamed --enable-optim configure:6461: * --enable-xmlf90 removed configure:6469: * new option --with-cuda-includes is available configure:6472: * new option --with-cuda-libs is available configure:6475: * new option --with-etsf-io-test-includes is available configure:6478: * new option --with-etsf-io-test-libs is available configure:6481: * --with-etsf-xc-includes renamed --with-libxc-includes configure:6489: * --with-etsf-xc-libs renamed --with-libxc-libs configure:6497: * --with-mpi-cc-ldflags removed configure:6505: * --with-mpi-cc-libs removed configure:6513: * --with-mpi-cflags removed configure:6521: * --with-mpi-cppflags removed configure:6529: * --with-mpi-cxx-ldflags removed configure:6537: * --with-mpi-cxx-libs removed configure:6545: * --with-mpi-cxxflags removed configure:6553: * --with-mpi-fc-ldflags removed configure:6561: * --with-mpi-fc-libs removed configure:6569: * --with-mpi-fcflags removed configure:6577: * --with-mpi-prefix has a new meaning configure:6579: please check that --with-mpi-prefix="/home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install" is OK for you configure:6582: * --with-xmlf90-includes removed configure:6590: * --with-xmlf90-libs removed configure:6632: checking consistency of external prerequisite options configure:6666: |---> all OK configure:6669: configure:6678: checking consistency of plug-in options configure:6691: |---> all OK configure:6694: configure:6712: parsing command-line options configure:7937: Initializing MPI support configure:7941: looking for MPI in /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install configure:7988: checking for a MPI C compiler configure:7998: result: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc configure:8002: checking for a MPI C++ compiler configure:8015: result: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicxx configure:8019: checking for a MPI Fortran compiler configure:8029: result: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpif90 configure:8033: checking for a MPI runner configure:8049: result: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpirun configure:8225: checking for sh configure:8243: found /usr/bin/sh configure:8256: result: /usr/bin/sh configure:8266: checking for perl configure:8284: found /usr/bin/perl configure:8297: result: /usr/bin/perl configure:8307: checking for rm configure:8325: found /bin/rm configure:8338: result: /bin/rm configure:8348: checking for mv configure:8366: found /bin/mv configure:8379: result: /bin/mv configure:8389: checking for tar configure:8407: found /bin/tar configure:8420: result: /bin/tar configure:8430: checking for latex configure:8461: result: /bin/false configure:8471: checking for dvips configure:8502: result: /bin/false configure:8512: checking for dvipdf configure:8530: found /usr/bin/dvipdf configure:8543: result: /usr/bin/dvipdf configure:8553: checking for ps2pdf configure:8571: found /usr/bin/ps2pdf configure:8584: result: /usr/bin/ps2pdf configure:8594: checking for markdown configure:8627: result: no configure:8634: checking for wget configure:8652: found /usr/bin/wget configure:8665: result: /usr/bin/wget configure:8676: using internal version of MarkDown configure:9001: checking for gcc configure:9028: result: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc configure:9260: checking for C compiler version configure:9268: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc --version >&5 icc (ICC) 11.1 20090827 Copyright (C) 1985-2009 Intel Corporation. All rights reserved. configure:9272: $? = 0 configure:9279: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -v >&5 mpicc for MPICH2 version 1.2.1 Version 11.1 configure:9283: $? = 0 configure:9290: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -V >&5 Intel(R) C Intel(R) 64 Compiler Professional for applications running on Intel(R) 64, Version 11.1 Build 20090827 Package ID: l_cproc_p_11.1.056 Copyright (C) 1985-2009 Intel Corporation. All rights reserved. FOR NON-COMMERCIAL USE ONLY configure:9294: $? = 0 configure:9317: checking for C compiler default output file name configure:9339: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc conftest.c >&5 configure:9343: $? = 0 configure:9381: result: a.out configure:9400: checking whether the C compiler works configure:9410: ./a.out configure:9414: $? = 0 configure:9433: result: yes configure:9440: checking whether we are cross compiling configure:9442: result: no configure:9445: checking for suffix of executables configure:9452: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -o conftest conftest.c >&5 configure:9456: $? = 0 configure:9482: result: configure:9488: checking for suffix of object files configure:9514: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -c conftest.c >&5 configure:9518: $? = 0 configure:9543: result: o configure:9547: checking whether we are using the GNU C compiler configure:9576: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -c conftest.c >&5 configure:9583: $? = 0 configure:9600: result: yes configure:9609: checking whether /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc accepts -g configure:9639: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -c -g conftest.c >&5 configure:9646: $? = 0 configure:9747: result: yes configure:9764: checking for /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc option to accept ISO C89 configure:9838: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -c -g -O2 conftest.c >&5 configure:9845: $? = 0 configure:9868: result: none needed configure:9897: checking for style of include used by make configure:9925: result: GNU configure:9950: checking dependency style of /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc configure:10060: result: gcc3 configure:10136: checking how to run the C preprocessor configure:10176: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -E conftest.c configure:10183: $? = 0 configure:10214: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -E conftest.c conftest.c(16): error #5: could not open source file "ac_nonexistent.h" #include <ac_nonexistent.h> ^ configure:10221: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "6.0.1" | #define PACKAGE_STRING "ABINIT 6.0.1" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "6.0.1" | #define ABINIT_VERSION "6.0.1" | #define ABINIT_VERSION_MAJOR "6" | #define ABINIT_VERSION_MINOR "0" | #define ABINIT_VERSION_MICRO "1" | #define ABINIT_VERSION_BUILD "20100208" | #define ABINIT_VERSION_BASE "6.0" | /* end confdefs.h. */ | #include <ac_nonexistent.h> configure:10254: result: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -E configure:10283: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -E conftest.c configure:10290: $? = 0 configure:10321: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -E conftest.c conftest.c(16): error #5: could not open source file "ac_nonexistent.h" #include <ac_nonexistent.h> ^ configure:10328: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "6.0.1" | #define PACKAGE_STRING "ABINIT 6.0.1" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "6.0.1" | #define ABINIT_VERSION "6.0.1" | #define ABINIT_VERSION_MAJOR "6" | #define ABINIT_VERSION_MINOR "0" | #define ABINIT_VERSION_MICRO "1" | #define ABINIT_VERSION_BUILD "20100208" | #define ABINIT_VERSION_BASE "6.0" | /* end confdefs.h. */ | #include <ac_nonexistent.h> configure:10381: checking which type of compiler we have configure:10592: result: gnu configure:10616: checking for sys/types.h configure:10637: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -c -g -O2 conftest.c >&5 configure:10644: $? = 0 configure:10661: result: yes configure:10616: checking for sys/stat.h configure:10637: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -c -g -O2 conftest.c >&5 configure:10644: $? = 0 configure:10661: result: yes configure:10616: checking for stdlib.h configure:10637: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -c -g -O2 conftest.c >&5 configure:10644: $? = 0 configure:10661: result: yes configure:10616: checking for string.h configure:10637: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -c -g -O2 conftest.c >&5 configure:10644: $? = 0 configure:10661: result: yes configure:10616: checking for memory.h configure:10637: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -c -g -O2 conftest.c >&5 configure:10644: $? = 0 configure:10661: result: yes configure:10616: checking for strings.h configure:10637: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -c -g -O2 conftest.c >&5 configure:10644: $? = 0 configure:10661: result: yes configure:10616: checking for inttypes.h configure:10637: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -c -g -O2 conftest.c >&5 configure:10644: $? = 0 configure:10661: result: yes configure:10616: checking for stdint.h configure:10637: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -c -g -O2 conftest.c >&5 configure:10644: $? = 0 configure:10661: result: yes configure:10616: checking for unistd.h configure:10637: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -c -g -O2 conftest.c >&5 configure:10644: $? = 0 configure:10661: result: yes configure:10677: checking for ANSI C header files configure:10707: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -c -g -O2 conftest.c >&5 configure:10714: $? = 0 configure:10813: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:10817: $? = 0 configure:10823: ./conftest configure:10827: $? = 0 configure:10845: result: yes configure:10872: checking stddef.h usability configure:10889: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -c -g -O2 conftest.c >&5 configure:10896: $? = 0 configure:10910: result: yes configure:10914: checking stddef.h presence configure:10929: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -E conftest.c configure:10936: $? = 0 configure:10950: result: yes configure:10983: checking for stddef.h configure:10992: result: yes configure:10872: checking stdarg.h usability configure:10889: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -c -g -O2 conftest.c >&5 configure:10896: $? = 0 configure:10910: result: yes configure:10914: checking stdarg.h presence configure:10929: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -E conftest.c configure:10936: $? = 0 configure:10950: result: yes configure:10983: checking for stdarg.h configure:10992: result: yes configure:11026: checking stdio.h usability configure:11043: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -c -g -O2 conftest.c >&5 configure:11050: $? = 0 configure:11064: result: yes configure:11068: checking stdio.h presence configure:11083: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -E conftest.c configure:11090: $? = 0 configure:11104: result: yes configure:11137: checking for stdio.h configure:11146: result: yes configure:11026: checking malloc.h usability configure:11043: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -c -g -O2 conftest.c >&5 configure:11050: $? = 0 configure:11064: result: yes configure:11068: checking malloc.h presence configure:11083: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -E conftest.c configure:11090: $? = 0 configure:11104: result: yes configure:11137: checking for malloc.h configure:11146: result: yes configure:11026: checking math.h usability configure:11043: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -c -g -O2 conftest.c >&5 configure:11050: $? = 0 configure:11064: result: yes configure:11068: checking math.h presence configure:11083: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -E conftest.c configure:11090: $? = 0 configure:11104: result: yes configure:11137: checking for math.h configure:11146: result: yes configure:11026: checking termios.h usability configure:11043: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -c -g -O2 conftest.c >&5 configure:11050: $? = 0 configure:11064: result: yes configure:11068: checking termios.h presence configure:11083: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -E conftest.c configure:11090: $? = 0 configure:11104: result: yes configure:11137: checking for termios.h configure:11146: result: yes configure:11171: checking for abort configure:11227: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:11234: $? = 0 configure:11256: result: yes configure:11278: checking size of int configure:11583: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:11587: $? = 0 configure:11593: ./conftest configure:11597: $? = 0 configure:11623: result: 4 configure:11637: checking size of unsigned int configure:11942: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:11946: $? = 0 configure:11952: ./conftest configure:11956: $? = 0 configure:11982: result: 4 configure:11996: checking size of float configure:12301: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:12305: $? = 0 configure:12311: ./conftest configure:12315: $? = 0 configure:12341: result: 4 configure:12355: checking size of double configure:12660: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:12664: $? = 0 configure:12670: ./conftest configure:12674: $? = 0 configure:12700: result: 8 configure:12714: checking size of long configure:13019: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:13023: $? = 0 configure:13029: ./conftest configure:13033: $? = 0 configure:13059: result: 8 configure:13073: checking size of unsigned long configure:13378: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:13382: $? = 0 configure:13388: ./conftest configure:13392: $? = 0 configure:13418: result: 8 configure:13432: checking size of long long configure:13737: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:13741: $? = 0 configure:13747: ./conftest configure:13751: $? = 0 configure:13777: result: 8 configure:13791: checking size of unsigned long long configure:14096: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:14100: $? = 0 configure:14106: ./conftest configure:14110: $? = 0 configure:14136: result: 8 configure:14150: checking size of size_t configure:14455: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:14459: $? = 0 configure:14465: ./conftest configure:14469: $? = 0 configure:14495: result: 8 configure:14509: checking size of ptrdiff_t configure:14814: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -o conftest -g -O2 conftest.c >&5 configure:14818: $? = 0 configure:14824: ./conftest configure:14828: $? = 0 configure:14854: result: 8 configure:14865: checking for an ANSI C-conforming const configure:14940: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -c -g -O2 conftest.c >&5 conftest.c(73): warning #592: variable "t" is used before its value is set *t++ = 0; ^ conftest.c(89): warning #592: variable "b" is used before its value is set struct s *b; b->j = 5; ^ conftest.c(95): warning #592: variable "cs" is used before its value is set return !cs[0] && !zero.x; ^ configure:14947: $? = 0 configure:14962: result: yes configure:14972: checking for size_t configure:15000: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -c -g -O2 conftest.c >&5 configure:15007: $? = 0 configure:15034: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -c -g -O2 conftest.c >&5 conftest.c(80): error: expected an expression if (sizeof ((size_t))) ^ compilation aborted for conftest.c (code 2) configure:15041: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "6.0.1" | #define PACKAGE_STRING "ABINIT 6.0.1" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "6.0.1" | #define ABINIT_VERSION "6.0.1" | #define ABINIT_VERSION_MAJOR "6" | #define ABINIT_VERSION_MINOR "0" | #define ABINIT_VERSION_MICRO "1" | #define ABINIT_VERSION_BUILD "20100208" | #define ABINIT_VERSION_BASE "6.0" | #define CC_GNU 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MATH_H 1 | #define HAVE_TERMIOS_H 1 | #define HAVE_ABORT 1 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG 8 | #define SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_SIZE_T 8 | #define SIZEOF_PTRDIFF_T 8 | /* end confdefs.h. */ | #include <stdio.h> | #ifdef HAVE_SYS_TYPES_H | # include <sys/types.h> | #endif | #ifdef HAVE_SYS_STAT_H | # include <sys/stat.h> | #endif | #ifdef STDC_HEADERS | # include <stdlib.h> | # include <stddef.h> | #else | # ifdef HAVE_STDLIB_H | # include <stdlib.h> | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include <memory.h> | # endif | # include <string.h> | #endif | #ifdef HAVE_STRINGS_H | # include <strings.h> | #endif | #ifdef HAVE_INTTYPES_H | # include <inttypes.h> | #endif | #ifdef HAVE_STDINT_H | # include <stdint.h> | #endif | #ifdef HAVE_UNISTD_H | # include <unistd.h> | #endif | int | main () | { | if (sizeof ((size_t))) | return 0; | ; | return 0; | } configure:15064: result: yes configure:15088: checking whether byte ordering is bigendian configure:15113: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -c conftest.c >&5 conftest.c(45): error: identifier "not" is undefined not a universal capable compiler ^ conftest.c(45): error: expected a ";" not a universal capable compiler ^ compilation aborted for conftest.c (code 2) configure:15120: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "6.0.1" | #define PACKAGE_STRING "ABINIT 6.0.1" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "6.0.1" | #define ABINIT_VERSION "6.0.1" | #define ABINIT_VERSION_MAJOR "6" | #define ABINIT_VERSION_MINOR "0" | #define ABINIT_VERSION_MICRO "1" | #define ABINIT_VERSION_BUILD "20100208" | #define ABINIT_VERSION_BASE "6.0" | #define CC_GNU 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MATH_H 1 | #define HAVE_TERMIOS_H 1 | #define HAVE_ABORT 1 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG 8 | #define SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_SIZE_T 8 | #define SIZEOF_PTRDIFF_T 8 | /* end confdefs.h. */ | #ifndef __APPLE_CC__ | not a universal capable compiler | #endif | typedef int dummy; | configure:15170: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -c conftest.c >&5 configure:15177: $? = 0 configure:15209: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -c conftest.c >&5 conftest.c(51): error: identifier "not" is undefined not big endian ^ conftest.c(51): error: expected a ";" not big endian ^ conftest.c(54): warning #12: parsing restarts here after previous syntax error ; ^ compilation aborted for conftest.c (code 2) configure:15216: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "6.0.1" | #define PACKAGE_STRING "ABINIT 6.0.1" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "6.0.1" | #define ABINIT_VERSION "6.0.1" | #define ABINIT_VERSION_MAJOR "6" | #define ABINIT_VERSION_MINOR "0" | #define ABINIT_VERSION_MICRO "1" | #define ABINIT_VERSION_BUILD "20100208" | #define ABINIT_VERSION_BASE "6.0" | #define CC_GNU 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MATH_H 1 | #define HAVE_TERMIOS_H 1 | #define HAVE_ABORT 1 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG 8 | #define SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_SIZE_T 8 | #define SIZEOF_PTRDIFF_T 8 | /* end confdefs.h. */ | #include <sys/types.h> | #include <sys/param.h> | | int | main () | { | #if BYTE_ORDER != BIG_ENDIAN | not big endian | #endif | | ; | return 0; | } configure:15468: result: no configure:15878: checking for C++ compiler version configure:15886: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicxx --version >&5 c++ (SUSE Linux) 4.3.2 [gcc-4_3-branch revision 141291] Copyright (C) 2008 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:15890: $? = 0 configure:15897: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicxx -v >&5 mpicxx for MPICH2 version 1.2.1 Using built-in specs. Target: x86_64-suse-linux Configured with: ../configure --prefix=/usr --infodir=/usr/share/info --mandir=/usr/share/man --libdir=/usr/lib64 --libexecdir=/usr/lib64 --enable-languages=c,c++,objc,fortran,obj-c++,java,ada --enable-checking=release --with-gxx-include-dir=/usr/include/c++/4.3 --enable-ssp --disable-libssp --with-bugurl=http://bugs.opensuse.org/ --with-pkgversion='SUSE Linux' --disable-libgcj --disable-libmudflap --with-slibdir=/lib64 --with-system-zlib --enable-__cxa_atexit --enable-libstdcxx-allocator=new --disable-libstdcxx-pch --enable-version-specific-runtime-libs --program-suffix=-4.3 --enable-linux-futex --without-system-libunwind --with-cpu=generic --build=x86_64-suse-linux Thread model: posix gcc version 4.3.2 [gcc-4_3-branch revision 141291] (SUSE Linux) configure:15901: $? = 0 configure:15908: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicxx -V >&5 c++: couldn't run 'x86_64-suse-linux-gcc--I/home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/include': No such file or directory configure:15912: $? = 1 configure:15915: checking whether we are using the GNU C++ compiler configure:15944: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicxx -c conftest.cpp >&5 configure:15951: $? = 0 configure:15968: result: yes configure:15977: checking whether /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicxx accepts -g configure:16007: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicxx -c -g conftest.cpp >&5 configure:16014: $? = 0 configure:16115: result: yes configure:16140: checking dependency style of /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicxx configure:16250: result: gcc3 configure:16279: checking which type of C++ compiler we have configure:16487: result: gnu 4.3 configure:16876: checking for Fortran compiler version configure:16884: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpif90 --version >&5 ifort (IFORT) 11.1 20091012 Copyright (C) 1985-2009 Intel Corporation. All rights reserved. configure:16888: $? = 0 configure:16895: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpif90 -v >&5 mpif90 for MPICH2 version 1.2.1 Version 11.1 configure:16899: $? = 0 configure:16906: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpif90 -V >&5 Intel(R) Fortran Intel(R) 64 Compiler Professional for applications running on Intel(R) 64, Version 11.1 Build 20091012 Package ID: l_cprof_p_11.1.059 Copyright (C) 1985-2009 Intel Corporation. All rights reserved. FOR NON-COMMERCIAL USE ONLY configure:16910: $? = 0 configure:16918: checking whether we are using the GNU Fortran compiler configure:16937: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpif90 -c conftest.F >&5 conftest.F(3): error #5082: Syntax error, found END-OF-STATEMENT when expecting one of: ( % : . = => choke me ---------------^ conftest.F(3): error #6218: This statement is positioned incorrectly and/or has syntax errors. choke me ---------------^ compilation aborted for conftest.F (code 1) configure:16944: $? = 1 configure: failed program was: | program main | #ifndef __GNUC__ | choke me | #endif | | end configure:16961: result: no configure:16967: checking whether /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpif90 accepts -g configure:16984: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpif90 -c -g conftest.f >&5 configure:16991: $? = 0 configure:17007: result: yes configure:17091: Fortran source will be preprocessed using C preprocessor configure:17112: checking which type of Fortran compiler we have configure:17504: result: intel 11.1 configure:17512: checking fortran 90 modules extension configure:17545: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpif90 -c -g conftest.f >&5 configure:17552: $? = 0 configure:17583: result: mod configure:17598: checking for Fortran flag to compile .F90 files configure:17620: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpif90 -c -g conftest.F90 >&5 configure:17627: $? = 0 configure:17646: result: none configure:17678: checking whether the Fortran compiler accepts exit() configure:17699: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpif90 -o conftest -g conftest.F90 >&5 configure:17706: $? = 0 configure:17740: result: yes configure:17746: checking whether the Fortran compiler accepts flush() configure:17767: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpif90 -o conftest -g conftest.F90 >&5 configure:17774: $? = 0 configure:17808: result: yes configure:17814: checking whether the Fortran compiler accepts gamma() configure:17836: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpif90 -o conftest -g conftest.F90 >&5 /tmp/ifortY5g4zB.o: In function `main': /home/hcg/Desktop/DESKTOP_sonu/CODES/ab-init/abinit-6.0.1/conftest.F90:4: undefined reference to `gamma_' configure:17843: $? = 1 configure: failed program was: | program main | | real :: x | x = gamma(1.5) | | end configure:17877: result: no configure:17883: checking whether the Fortran compiler accepts get_environment_variable configure:17907: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpif90 -o conftest -g conftest.F90 >&5 configure:17914: $? = 0 configure:17948: result: yes configure:17954: checking whether the Fortran compiler accepts quadruple integers configure:17975: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpif90 -o conftest -g conftest.F90 >&5 conftest.F90(3): error #6216: This length or width specifier has been incorrectly used in this context. [16] integer*16 my_int --------------------^ compilation aborted for conftest.F90 (code 1) configure:17982: $? = 1 configure: failed program was: | program main | | integer*16 my_int | | end configure:18016: result: no configure:18022: checking whether the Fortran compiler accepts long lines configure:18043: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpif90 -o conftest -g conftest.F90 >&5 configure:18050: $? = 0 configure:18084: result: yes configure:18090: checking whether the Fortran compiler accepts the null() intrinsic configure:18115: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpif90 -o conftest -g conftest.F90 >&5 configure:18122: $? = 0 configure:18156: result: yes configure:18180: checking how to get verbose linking output from /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpif90 configure:18196: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpif90 -c conftest.F90 >&5 configure:18203: $? = 0 configure:18225: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpif90 -o conftest -v conftest.F90 mpif90 for MPICH2 version 1.2.1 Version 11.1 /opt/intel/Compiler/11.1/059/bin/intel64/fpp -D__INTEL_COMPILER=1110 -D_MT -D__ELF__ -D__INTEL_COMPILER_BUILD_DATE=20091012 -D__PTRDIFF_TYPE__=long "-D__SIZE_TYPE__=unsigned long" -D__WCHAR_TYPE__=int "-D__WINT_TYPE__=unsigned int" "-D__INTMAX_TYPE__=long int" "-D__UINTMAX_TYPE__=long unsigned int" -D__LONG_MAX__=9223372036854775807L -D__unix__ -D__unix -D__linux__ -D__linux -D__gnu_linux__ -Dunix -Dlinux -D__x86_64 -D__x86_64__ -I. -I/home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/include -I/home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/include -I/opt/intel/Compiler/11.1/059/include/intel64 -I/opt/intel/Compiler/11.1/056/mkl/include -I/opt/intel/Compiler/11.1/059/mkl/include -I/opt/intel/Compiler/11.1/056/mkl/include -I/opt/intel/Compiler/11.1/059/mkl/include -I/opt/intel/Compiler/11.1/059/include/intel64 -I/opt/intel/Compiler/11.1/059/include -I/usr/local/include -I/usr/include -I/usr/lib64/gcc/x86_64-suse-linux/4.3/include -4Ycpp -4Ncvf -f_com=yes conftest.F90 /tmp/ifortV9upiI.i90 /opt/intel/Compiler/11.1/059/bin/intel64/fortcom -D__INTEL_COMPILER=1110 -D_MT -D__ELF__ -D__INTEL_COMPILER_BUILD_DATE=20091012 -D__unix__ -D__unix -D__linux__ -D__linux -D__gnu_linux__ -Dunix -Dlinux -D__x86_64 -D__x86_64__ -mGLOB_pack_sort_init_list -I. -I/home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/include -I/home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/include -I/opt/intel/Compiler/11.1/059/include/intel64 -I/opt/intel/Compiler/11.1/056/mkl/include -I/opt/intel/Compiler/11.1/059/mkl/include -I/opt/intel/Compiler/11.1/056/mkl/include -I/opt/intel/Compiler/11.1/059/mkl/include -I/opt/intel/Compiler/11.1/059/include/intel64 -I/opt/intel/Compiler/11.1/059/include -I/usr/local/include -I/usr/include -I/usr/lib64/gcc/x86_64-suse-linux/4.3/include -O2 -mP1OPT_version=11.1-intel64 -mGLOB_diag_file=/tmp/ifort9dKnQl.diag -mGLOB_source_language=GLOB_SOURCE_LANGUAGE_F90 -mGLOB_tune_for_fort -mGLOB_use_fort_dope_vector -mP2OPT_static_promotion -mP1OPT_print_version=FALSE -mP3OPT_use_mspp_call_convention -mCG_use_gas_got_workaround=F -mP2OPT_align_option_used=TRUE "-mGLOB_options_string=-I/home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/include -I/home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/include -o conftest -v -L/home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib -L/home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib -lmpichf90 -lmpichf90 -lmpich -lopa -lpthread -lrt" -mGLOB_cxx_limited_range=FALSE -mGLOB_as_output_backup_file_name=/tmp/ifortUGuIFNas_.s -mIPOPT_activate -mIPOPT_lite -mGLOB_machine_model=GLOB_MACHINE_MODEL_EFI2 -mGLOB_extended_instructions=0x8 -mP2OPT_subs_out_of_bound=FALSE -mGLOB_ansi_alias -mIPOPT_args_in_regs=0 -mPGOPTI_value_profile_use=T -mP2OPT_hlo_level=2 -mP2OPT_hlo -mIPOPT_obj_output_file_name=/tmp/ifort9dKnQl.o -mGLOB_linker_version=2.19 -mP3OPT_asm_target=P3OPT_ASM_TARGET_GAS -mGLOB_obj_output_file=/tmp/ifort9dKnQl.o -mGLOB_source_dialect=GLOB_SOURCE_DIALECT_FORTRAN -mP1OPT_source_file_name=conftest.F90 /tmp/ifortV9upiI.i90 ld /usr/lib64/gcc/x86_64-suse-linux/4.3/../../../../lib64/crt1.o /usr/lib64/gcc/x86_64-suse-linux/4.3/../../../../lib64/crti.o /usr/lib64/gcc/x86_64-suse-linux/4.3/crtbegin.o --eh-frame-hdr -dynamic-linker /lib64/ld-linux-x86-64.so.2 -o conftest /opt/intel/Compiler/11.1/059/lib/intel64/for_main.o /tmp/ifort9dKnQl.o -L/home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib -L/home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib -lmpichf90 -lmpichf90 -lmpich -lopa -lpthread -lrt -L/opt/intel/Compiler/11.1/056/lib/intel64 -L/opt/intel/Compiler/11.1/056/ipp/em64t/lib -L/opt/intel/Compiler/11.1/056/mkl/lib/em64t -L/opt/intel/Compiler/11.1/056/tbb/intel64/cc4.1.0_libc2.4_kernel2.6.16.21/lib -L/opt/intel/Compiler/11.1/059/lib/intel64 -L/opt/intel/Compiler/11.1/059/mkl/lib/em64t -L/opt/intel/Compiler/11.1/056/lib/intel64 -L/opt/intel/Compiler/11.1/056/ipp/em64t/lib -L/opt/intel/Compiler/11.1/056/mkl/lib/em64t -L/opt/intel/Compiler/11.1/056/tbb/intel64/cc4.1.0_libc2.4_kernel2.6.16.21/lib -L/opt/intel/Compiler/11.1/059/lib/intel64 -L/opt/intel/Compiler/11.1/059/mkl/lib/em64t -L/opt/intel/Compiler/11.1/059/lib/intel64 -L/usr/lib64/gcc/x86_64-suse-linux/4.3 -L/usr/lib64/gcc/x86_64-suse-linux/4.3/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/opt/intel/Compiler/11.1/056/lib/intel64 -L/opt/intel/Compiler/11.1/056/ipp/em64t/lib -L/opt/intel/Compiler/11.1/056/mkl/lib/em64t -L/opt/intel/Compiler/11.1/056/tbb/intel64/cc4.1.0_libc2.4_kernel2.6.16.21/lib -L/opt/intel/Compiler/11.1/059/lib/intel64 -L/opt/intel/Compiler/11.1/059/mkl/lib/em64t -L/usr/lib64/gcc/x86_64-suse-linux/4.3/../../../../x86_64-suse-linux/lib -L/usr/lib64/gcc/x86_64-suse-linux/4.3/../../.. -L/lib64 -L/lib -L/usr/lib64 -L/usr/lib -Bstatic -lifport -lifcore -limf -lsvml -Bdynamic -lm -Bstatic -lipgo -lirc -u __pthread_once -Bdynamic -lpthread -lc -lgcc_s -lgcc -Bstatic -lirc_s -Bdynamic -ldl -lc /usr/lib64/gcc/x86_64-suse-linux/4.3/crtend.o /usr/lib64/gcc/x86_64-suse-linux/4.3/../../../../lib64/crtn.o rm /tmp/ifortXXuDWClibgcc rm /tmp/ifort6DwmoZgnudirs rm /tmp/ifortV9upiI.i90 rm /tmp/ifortyADsK4arg rm /tmp/ifortvqcNcrgas rm /tmp/ifortUGuIFNas_.s rm /tmp/ifortM9rE89ldashv rm /tmp/ifortkNi7Bwarg rm /tmp/ifortxY1K8Sgnudirs rm /tmp/ifort9dKnQl.o configure:18294: result: -v configure:18296: checking for Fortran libraries of /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpif90 configure:18319: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpif90 -o conftest -v conftest.F90 mpif90 for MPICH2 version 1.2.1 Version 11.1 /opt/intel/Compiler/11.1/059/bin/intel64/fpp -D__INTEL_COMPILER=1110 -D_MT -D__ELF__ -D__INTEL_COMPILER_BUILD_DATE=20091012 -D__PTRDIFF_TYPE__=long "-D__SIZE_TYPE__=unsigned long" -D__WCHAR_TYPE__=int "-D__WINT_TYPE__=unsigned int" "-D__INTMAX_TYPE__=long int" "-D__UINTMAX_TYPE__=long unsigned int" -D__LONG_MAX__=9223372036854775807L -D__unix__ -D__unix -D__linux__ -D__linux -D__gnu_linux__ -Dunix -Dlinux -D__x86_64 -D__x86_64__ -I. -I/home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/include -I/home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/include -I/opt/intel/Compiler/11.1/059/include/intel64 -I/opt/intel/Compiler/11.1/056/mkl/include -I/opt/intel/Compiler/11.1/059/mkl/include -I/opt/intel/Compiler/11.1/056/mkl/include -I/opt/intel/Compiler/11.1/059/mkl/include -I/opt/intel/Compiler/11.1/059/include/intel64 -I/opt/intel/Compiler/11.1/059/include -I/usr/local/include -I/usr/include -I/usr/lib64/gcc/x86_64-suse-linux/4.3/include -4Ycpp -4Ncvf -f_com=yes conftest.F90 /tmp/ifort8GgjeI.i90 /opt/intel/Compiler/11.1/059/bin/intel64/fortcom -D__INTEL_COMPILER=1110 -D_MT -D__ELF__ -D__INTEL_COMPILER_BUILD_DATE=20091012 -D__unix__ -D__unix -D__linux__ -D__linux -D__gnu_linux__ -Dunix -Dlinux -D__x86_64 -D__x86_64__ -mGLOB_pack_sort_init_list -I. -I/home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/include -I/home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/include -I/opt/intel/Compiler/11.1/059/include/intel64 -I/opt/intel/Compiler/11.1/056/mkl/include -I/opt/intel/Compiler/11.1/059/mkl/include -I/opt/intel/Compiler/11.1/056/mkl/include -I/opt/intel/Compiler/11.1/059/mkl/include -I/opt/intel/Compiler/11.1/059/include/intel64 -I/opt/intel/Compiler/11.1/059/include -I/usr/local/include -I/usr/include -I/usr/lib64/gcc/x86_64-suse-linux/4.3/include -O2 -mP1OPT_version=11.1-intel64 -mGLOB_diag_file=/tmp/ifortAFeRul.diag -mGLOB_source_language=GLOB_SOURCE_LANGUAGE_F90 -mGLOB_tune_for_fort -mGLOB_use_fort_dope_vector -mP2OPT_static_promotion -mP1OPT_print_version=FALSE -mP3OPT_use_mspp_call_convention -mCG_use_gas_got_workaround=F -mP2OPT_align_option_used=TRUE "-mGLOB_options_string=-I/home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/include -I/home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/include -o conftest -v -L/home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib -L/home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib -lmpichf90 -lmpichf90 -lmpich -lopa -lpthread -lrt" -mGLOB_cxx_limited_range=FALSE -mGLOB_as_output_backup_file_name=/tmp/ifortCtd4rOas_.s -mIPOPT_activate -mIPOPT_lite -mGLOB_machine_model=GLOB_MACHINE_MODEL_EFI2 -mGLOB_extended_instructions=0x8 -mP2OPT_subs_out_of_bound=FALSE -mGLOB_ansi_alias -mIPOPT_args_in_regs=0 -mPGOPTI_value_profile_use=T -mP2OPT_hlo_level=2 -mP2OPT_hlo -mIPOPT_obj_output_file_name=/tmp/ifortAFeRul.o -mGLOB_linker_version=2.19 -mP3OPT_asm_target=P3OPT_ASM_TARGET_GAS -mGLOB_obj_output_file=/tmp/ifortAFeRul.o -mGLOB_source_dialect=GLOB_SOURCE_DIALECT_FORTRAN -mP1OPT_source_file_name=conftest.F90 /tmp/ifort8GgjeI.i90 ld /usr/lib64/gcc/x86_64-suse-linux/4.3/../../../../lib64/crt1.o /usr/lib64/gcc/x86_64-suse-linux/4.3/../../../../lib64/crti.o /usr/lib64/gcc/x86_64-suse-linux/4.3/crtbegin.o --eh-frame-hdr -dynamic-linker /lib64/ld-linux-x86-64.so.2 -o conftest /opt/intel/Compiler/11.1/059/lib/intel64/for_main.o /tmp/ifortAFeRul.o -L/home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib -L/home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib -lmpichf90 -lmpichf90 -lmpich -lopa -lpthread -lrt -L/opt/intel/Compiler/11.1/056/lib/intel64 -L/opt/intel/Compiler/11.1/056/ipp/em64t/lib -L/opt/intel/Compiler/11.1/056/mkl/lib/em64t -L/opt/intel/Compiler/11.1/056/tbb/intel64/cc4.1.0_libc2.4_kernel2.6.16.21/lib -L/opt/intel/Compiler/11.1/059/lib/intel64 -L/opt/intel/Compiler/11.1/059/mkl/lib/em64t -L/opt/intel/Compiler/11.1/056/lib/intel64 -L/opt/intel/Compiler/11.1/056/ipp/em64t/lib -L/opt/intel/Compiler/11.1/056/mkl/lib/em64t -L/opt/intel/Compiler/11.1/056/tbb/intel64/cc4.1.0_libc2.4_kernel2.6.16.21/lib -L/opt/intel/Compiler/11.1/059/lib/intel64 -L/opt/intel/Compiler/11.1/059/mkl/lib/em64t -L/opt/intel/Compiler/11.1/059/lib/intel64 -L/usr/lib64/gcc/x86_64-suse-linux/4.3 -L/usr/lib64/gcc/x86_64-suse-linux/4.3/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/opt/intel/Compiler/11.1/056/lib/intel64 -L/opt/intel/Compiler/11.1/056/ipp/em64t/lib -L/opt/intel/Compiler/11.1/056/mkl/lib/em64t -L/opt/intel/Compiler/11.1/056/tbb/intel64/cc4.1.0_libc2.4_kernel2.6.16.21/lib -L/opt/intel/Compiler/11.1/059/lib/intel64 -L/opt/intel/Compiler/11.1/059/mkl/lib/em64t -L/usr/lib64/gcc/x86_64-suse-linux/4.3/../../../../x86_64-suse-linux/lib -L/usr/lib64/gcc/x86_64-suse-linux/4.3/../../.. -L/lib64 -L/lib -L/usr/lib64 -L/usr/lib -Bstatic -lifport -lifcore -limf -lsvml -Bdynamic -lm -Bstatic -lipgo -lirc -u __pthread_once -Bdynamic -lpthread -lc -lgcc_s -lgcc -Bstatic -lirc_s -Bdynamic -ldl -lc /usr/lib64/gcc/x86_64-suse-linux/4.3/crtend.o /usr/lib64/gcc/x86_64-suse-linux/4.3/../../../../lib64/crtn.o rm /tmp/ifortiyoh2Blibgcc rm /tmp/iforthMKpLYgnudirs rm /tmp/ifort8GgjeI.i90 rm /tmp/ifortwPIPX4arg rm /tmp/ifortLMkDHrgas rm /tmp/ifortCtd4rOas_.s rm /tmp/ifort4HMvcbldashv rm /tmp/ifortlWenXxarg rm /tmp/ifortqw97KUgnudirs rm /tmp/ifortAFeRul.o configure:18496: result: -L/home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib -lmpichf90 -lmpich -lopa -lpthread -lrt -L/opt/intel/Compiler/11.1/056/lib/intel64 -L/opt/intel/Compiler/11.1/056/ipp/em64t/lib -L/opt/intel/Compiler/11.1/056/mkl/lib/em64t -L/opt/intel/Compiler/11.1/056/tbb/intel64/cc4.1.0_libc2.4_kernel2.6.16.21/lib -L/opt/intel/Compiler/11.1/059/lib/intel64 -L/opt/intel/Compiler/11.1/059/mkl/lib/em64t -L/usr/lib64/gcc/x86_64-suse-linux/4.3 -L/usr/lib64/gcc/x86_64-suse-linux/4.3/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-suse-linux/4.3/../../../../x86_64-suse-linux/lib -L/usr/lib64/gcc/x86_64-suse-linux/4.3/../../.. -L/lib64 -L/lib -L/usr/lib64 -L/usr/lib -lifport -lifcore -limf -lsvml -lm -lipgo -lirc -lirc_s -ldl configure:18512: checking for dummy main to link with Fortran libraries configure:18556: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -o conftest conftest.c -L/home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib -lmpichf90 -lmpich -lopa -lpthread -lrt -L/opt/intel/Compiler/11.1/056/lib/intel64 -L/opt/intel/Compiler/11.1/056/ipp/em64t/lib -L/opt/intel/Compiler/11.1/056/mkl/lib/em64t -L/opt/intel/Compiler/11.1/056/tbb/intel64/cc4.1.0_libc2.4_kernel2.6.16.21/lib -L/opt/intel/Compiler/11.1/059/lib/intel64 -L/opt/intel/Compiler/11.1/059/mkl/lib/em64t -L/usr/lib64/gcc/x86_64-suse-linux/4.3 -L/usr/lib64/gcc/x86_64-suse-linux/4.3/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-suse-linux/4.3/../../../../x86_64-suse-linux/lib -L/usr/lib64/gcc/x86_64-suse-linux/4.3/../../.. -L/lib64 -L/lib -L/usr/lib64 -L/usr/lib -lifport -lifcore -limf -lsvml -lm -lipgo -lirc -lirc_s -ldl >&5 configure:18563: $? = 0 configure:18651: result: none configure:18690: checking for Fortran name-mangling scheme configure:18709: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpif90 -c conftest.F90 >&5 configure:18716: $? = 0 configure:18771: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -o conftest conftest.c cfortran_test.o -L/home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib -lmpichf90 -lmpich -lopa -lpthread -lrt -L/opt/intel/Compiler/11.1/056/lib/intel64 -L/opt/intel/Compiler/11.1/056/ipp/em64t/lib -L/opt/intel/Compiler/11.1/056/mkl/lib/em64t -L/opt/intel/Compiler/11.1/056/tbb/intel64/cc4.1.0_libc2.4_kernel2.6.16.21/lib -L/opt/intel/Compiler/11.1/059/lib/intel64 -L/opt/intel/Compiler/11.1/059/mkl/lib/em64t -L/usr/lib64/gcc/x86_64-suse-linux/4.3 -L/usr/lib64/gcc/x86_64-suse-linux/4.3/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-suse-linux/4.3/../../../../x86_64-suse-linux/lib -L/usr/lib64/gcc/x86_64-suse-linux/4.3/../../.. -L/lib64 -L/lib -L/usr/lib64 -L/usr/lib -lifport -lifcore -limf -lsvml -lm -lipgo -lirc -lirc_s -ldl >&5 /tmp/iccRgfiuQ.o: In function `main': conftest.c:(.text+0x2b): undefined reference to `foobar' configure:18778: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "6.0.1" | #define PACKAGE_STRING "ABINIT 6.0.1" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "6.0.1" | #define ABINIT_VERSION "6.0.1" | #define ABINIT_VERSION_MAJOR "6" | #define ABINIT_VERSION_MINOR "0" | #define ABINIT_VERSION_MICRO "1" | #define ABINIT_VERSION_BUILD "20100208" | #define ABINIT_VERSION_BASE "6.0" | #define CC_GNU 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MATH_H 1 | #define HAVE_TERMIOS_H 1 | #define HAVE_ABORT 1 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG 8 | #define SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_SIZE_T 8 | #define SIZEOF_PTRDIFF_T 8 | #define CXX_GNU 1 | #define FC_INTEL 1 | #define HAVE_FC_EXIT 1 | #define HAVE_FC_FLUSH 1 | #define HAVE_FC_GET_ENVIRONMENT_VARIABLE 1 | #define HAVE_FC_LONG_LINES 1 | #define HAVE_FC_NULL 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char foobar (); | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return foobar (); | ; | return 0; | } configure:18771: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -o conftest conftest.c cfortran_test.o -L/home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib -lmpichf90 -lmpich -lopa -lpthread -lrt -L/opt/intel/Compiler/11.1/056/lib/intel64 -L/opt/intel/Compiler/11.1/056/ipp/em64t/lib -L/opt/intel/Compiler/11.1/056/mkl/lib/em64t -L/opt/intel/Compiler/11.1/056/tbb/intel64/cc4.1.0_libc2.4_kernel2.6.16.21/lib -L/opt/intel/Compiler/11.1/059/lib/intel64 -L/opt/intel/Compiler/11.1/059/mkl/lib/em64t -L/usr/lib64/gcc/x86_64-suse-linux/4.3 -L/usr/lib64/gcc/x86_64-suse-linux/4.3/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-suse-linux/4.3/../../../../x86_64-suse-linux/lib -L/usr/lib64/gcc/x86_64-suse-linux/4.3/../../.. -L/lib64 -L/lib -L/usr/lib64 -L/usr/lib -lifport -lifcore -limf -lsvml -lm -lipgo -lirc -lirc_s -ldl >&5 configure:18778: $? = 0 configure:18860: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -o conftest conftest.c cfortran_test.o -L/home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib -lmpichf90 -lmpich -lopa -lpthread -lrt -L/opt/intel/Compiler/11.1/056/lib/intel64 -L/opt/intel/Compiler/11.1/056/ipp/em64t/lib -L/opt/intel/Compiler/11.1/056/mkl/lib/em64t -L/opt/intel/Compiler/11.1/056/tbb/intel64/cc4.1.0_libc2.4_kernel2.6.16.21/lib -L/opt/intel/Compiler/11.1/059/lib/intel64 -L/opt/intel/Compiler/11.1/059/mkl/lib/em64t -L/usr/lib64/gcc/x86_64-suse-linux/4.3 -L/usr/lib64/gcc/x86_64-suse-linux/4.3/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-suse-linux/4.3/../../../../x86_64-suse-linux/lib -L/usr/lib64/gcc/x86_64-suse-linux/4.3/../../.. -L/lib64 -L/lib -L/usr/lib64 -L/usr/lib -lifport -lifcore -limf -lsvml -lm -lipgo -lirc -lirc_s -ldl >&5 configure:18867: $? = 0 configure:18930: result: lower case, underscore, no extra underscore configure:19061: checking for python configure:19077: found /usr/bin/python configure:19088: result: python configure:19103: checking for python-config configure:19119: found /usr/bin/python-config configure:19130: result: python-config configure:19151: checking for Python CPPFLAGS configure:19156: result: -I/usr/include/python2.6 -I/usr/include/python2.6 configure:19165: checking for bzr configure:19195: result: no configure:19212: checking for Python NumPy headers configure:19231: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -c -I/usr/include/python2.6 -I/usr/include/python2.6 conftest.c >&5 conftest.c(3): catastrophic error: could not open source file "numpy/arrayobject.h" #include <numpy/arrayobject.h> ^ compilation aborted for conftest.c (code 4) configure:19238: $? = 4 configure: failed program was: | | #include <Python.h> | #include <numpy/arrayobject.h> | | int main(int argc, char** argv) | { | return 0; | } configure:19261: result: not found configure:19277: checking numarray/arrayobject.h usability configure:19294: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -c -I/usr/include/python2.6 -I/usr/include/python2.6 conftest.c >&5 conftest.c(86): catastrophic error: could not open source file "numarray/arrayobject.h" #include <numarray/arrayobject.h> ^ compilation aborted for conftest.c (code 4) configure:19301: $? = 4 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "6.0.1" | #define PACKAGE_STRING "ABINIT 6.0.1" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "6.0.1" | #define ABINIT_VERSION "6.0.1" | #define ABINIT_VERSION_MAJOR "6" | #define ABINIT_VERSION_MINOR "0" | #define ABINIT_VERSION_MICRO "1" | #define ABINIT_VERSION_BUILD "20100208" | #define ABINIT_VERSION_BASE "6.0" | #define CC_GNU 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MATH_H 1 | #define HAVE_TERMIOS_H 1 | #define HAVE_ABORT 1 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG 8 | #define SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_SIZE_T 8 | #define SIZEOF_PTRDIFF_T 8 | #define CXX_GNU 1 | #define FC_INTEL 1 | #define HAVE_FC_EXIT 1 | #define HAVE_FC_FLUSH 1 | #define HAVE_FC_GET_ENVIRONMENT_VARIABLE 1 | #define HAVE_FC_LONG_LINES 1 | #define HAVE_FC_NULL 1 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | /* end confdefs.h. */ | #include <stdio.h> | #ifdef HAVE_SYS_TYPES_H | # include <sys/types.h> | #endif | #ifdef HAVE_SYS_STAT_H | # include <sys/stat.h> | #endif | #ifdef STDC_HEADERS | # include <stdlib.h> | # include <stddef.h> | #else | # ifdef HAVE_STDLIB_H | # include <stdlib.h> | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include <memory.h> | # endif | # include <string.h> | #endif | #ifdef HAVE_STRINGS_H | # include <strings.h> | #endif | #ifdef HAVE_INTTYPES_H | # include <inttypes.h> | #endif | #ifdef HAVE_STDINT_H | # include <stdint.h> | #endif | #ifdef HAVE_UNISTD_H | # include <unistd.h> | #endif | #include <numarray/arrayobject.h> configure:19315: result: no configure:19319: checking numarray/arrayobject.h presence configure:19334: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -E -I/usr/include/python2.6 -I/usr/include/python2.6 conftest.c conftest.c(53): error #5: could not open source file "numarray/arrayobject.h" #include <numarray/arrayobject.h> ^ configure:19341: $? = 2 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "6.0.1" | #define PACKAGE_STRING "ABINIT 6.0.1" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "6.0.1" | #define ABINIT_VERSION "6.0.1" | #define ABINIT_VERSION_MAJOR "6" | #define ABINIT_VERSION_MINOR "0" | #define ABINIT_VERSION_MICRO "1" | #define ABINIT_VERSION_BUILD "20100208" | #define ABINIT_VERSION_BASE "6.0" | #define CC_GNU 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MATH_H 1 | #define HAVE_TERMIOS_H 1 | #define HAVE_ABORT 1 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG 8 | #define SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_SIZE_T 8 | #define SIZEOF_PTRDIFF_T 8 | #define CXX_GNU 1 | #define FC_INTEL 1 | #define HAVE_FC_EXIT 1 | #define HAVE_FC_FLUSH 1 | #define HAVE_FC_GET_ENVIRONMENT_VARIABLE 1 | #define HAVE_FC_LONG_LINES 1 | #define HAVE_FC_NULL 1 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | /* end confdefs.h. */ | #include <numarray/arrayobject.h> configure:19355: result: no configure:19388: checking for numarray/arrayobject.h configure:19395: result: no configure:19673: checking for ar configure:19689: found /usr/bin/ar configure:19700: result: ar configure:19761: checking for ranlib configure:19777: found /usr/bin/ranlib configure:19788: result: ranlib configure:19858: checking for cpp configure:19874: found /usr/bin/cpp configure:19885: result: cpp configure:19968: checking which cpp hints to apply configure:19994: result: default/default/default configure:20003: checking which cc hints to apply configure:20056: result: gnu/default/default configure:20067: checking which xpp hints to apply configure:20071: result: none/none/none configure:20080: checking which cxx hints to apply configure:20133: result: gnu/default/default configure:20144: checking which fpp hints to apply configure:20148: result: none/none/none configure:20157: checking which fc hints to apply configure:20343: result: intel/default/default configure:20354: checking which ar hints to apply configure:20373: result: none/none/none configure:20454: checking debugging status configure:20462: result: enabled (custom flags are allowed) configure:20524: setting C debug flags to '-g' configure:20534: setting C++ debug flags to '-g' configure:20544: setting Fortran debug flags to '-g' configure:20568: checking whether to activate debug mode in source files configure:20580: result: no configure:20915: checking optimization status configure:20927: result: enabled (profile mode: standard) configure:20940: WARNING: --with-cc-optflags will be ignored, unless you use --enable-optim=yes configure:20949: WARNING: --with-cxx-optflags will be ignored, unless you use --enable-optim=yes configure:20958: WARNING: --with-fc-optflags will be ignored, unless you use --enable-optim=yes configure:21014: checking which cc optimizations to apply configure:21976: result: gnu/default/intel_xeon configure:21990: checking which cxx optimizations to apply configure:22952: result: gnu/default/intel_xeon configure:22966: checking which fc optimizations to apply configure:24544: result: intel/default/default configure:24562: checking whether to apply per-directory optimizations configure:24568: result: yes configure:25649: checking for a 64-bit architecture configure:25651: result: yes configure:25653: checking whether to use 64-bit flags configure:25655: result: no configure:25657: checking for user-defined 64-bit flags configure:25660: result: none configure:25868: checking whether the C compiler supports MPI configure:26112: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -o conftest -g -O3 -fschedule-insns2 -march=nocona -mmmx -msse -msse2 -msse3 -mfpmath=sse conftest.c >&5 icc: command line warning #10006: ignoring unknown option '-fschedule-insns2' icc: command line warning #10120: overriding '-marchnocona' with '-msse' icc: command line warning #10120: overriding '-msse' with '-msse3' icc: command line warning #10159: invalid argument for option '-m' configure:26119: $? = 0 configure:26341: result: yes configure:26347: checking whether the C++ compiler supports MPI configure:26588: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicxx -o conftest -g -O3 -fschedule-insns2 -march=nocona -mmmx -msse -msse2 -msse3 -mfpmath=sse conftest.cpp >&5 /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(helper_fns.o): In function `MPIUI_Memcpy': helper_fns.c:(.text+0x18d2): undefined reference to `_intel_fast_memcpy' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(comm_get_name.o): In function `MPI_Comm_get_name': comm_get_name.c:(.text+0x142): undefined reference to `__intel_sse2_strlen' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(intercomm_create.o): In function `MPI_Intercomm_create': intercomm_create.c:(.text+0x958): undefined reference to `_intel_fast_memset' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(commutil.o): In function `MPIUI_Memcpy': commutil.c:(.text+0x2687): undefined reference to `_intel_fast_memcpy' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(pack.o): In function `MPIUI_Memcpy': pack.c:(.text+0x9d2): undefined reference to `_intel_fast_memcpy' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(unpack.o): In function `MPIUI_Memcpy': unpack.c:(.text+0x8a2): undefined reference to `_intel_fast_memcpy' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(type_get_name.o): In function `MPI_Type_get_name': type_get_name.c:(.text+0x1a0): undefined reference to `__intel_sse2_strlen' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(type_set_name.o): In function `MPI_Type_set_name': type_set_name.c:(.text+0x179): undefined reference to `__intel_sse2_strlen' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(type_indexed.o): In function `MPI_Type_indexed': type_indexed.c:(.text+0x2ab): undefined reference to `_intel_fast_memcpy' type_indexed.c:(.text+0x30c): undefined reference to `_intel_fast_memcpy' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(type_create_struct.o): In function `MPI_Type_create_struct': type_create_struct.c:(.text+0x2d6): undefined reference to `_intel_fast_memcpy' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(type_create_hindexed.o): In function `MPI_Type_create_hindexed': type_create_hindexed.c:(.text+0x2b5): undefined reference to `_intel_fast_memcpy' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(type_create_indexed_block.o): In function `MPI_Type_create_indexed_block': type_create_indexed_block.c:(.text+0x27f): undefined reference to `_intel_fast_memcpy' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(type_create_darray.o):type_create_darray.c:(.text+0x8ff): more undefined references to `_intel_fast_memcpy' follow /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(error_string.o): In function `MPI_Error_string': error_string.c:(.text+0xb7): undefined reference to `__intel_sse2_strlen' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(errutil.o): In function `MPIUI_Memcpy': errutil.c:(.text+0xa2): undefined reference to `_intel_fast_memcpy' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(errutil.o): In function `vsnprintf_mpi': errutil.c:(.text+0x9e1): undefined reference to `__intel_sse2_strlen' errutil.c:(.text+0xa53): undefined reference to `__intel_sse2_strlen' errutil.c:(.text+0xac5): undefined reference to `__intel_sse2_strlen' errutil.c:(.text+0xb2f): undefined reference to `__intel_sse2_strlen' errutil.c:(.text+0xbb4): undefined reference to `__intel_sse2_strlen' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(errutil.o):errutil.c:(.text+0xd43): more undefined references to `__intel_sse2_strlen' follow /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(dynerrutil.o): In function `MPIR_Err_add_code': dynerrutil.c:(.text+0x168): undefined reference to `_intel_fast_memset' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(dynerrutil.o): In function `MPIR_Err_add_class': dynerrutil.c:(.text+0x20f): undefined reference to `_intel_fast_memset' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(dynerrutil.o): In function `MPIR_Err_set_msg': dynerrutil.c:(.text+0x2a9): undefined reference to `__intel_sse2_strlen' dynerrutil.c:(.text+0x40e): undefined reference to `_intel_fast_memset' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(group_range_excl.o): In function `MPI_Group_range_excl': group_range_excl.c:(.text+0x200): undefined reference to `__svml_idiv4' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(group_range_incl.o): In function `MPI_Group_range_incl': group_range_incl.c:(.text+0x1f9): undefined reference to `__svml_idiv4' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(bsendutil.o): In function `MPIUI_Memcpy': bsendutil.c:(.text+0x9b2): undefined reference to `_intel_fast_memcpy' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(win_get_name.o): In function `MPI_Win_get_name': win_get_name.c:(.text+0x11c): undefined reference to `__intel_sse2_strlen' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(graphcreate.o): In function `MPIR_Graph_create': graphcreate.c:(.text+0x27a): undefined reference to `_intel_fast_memcpy' graphcreate.c:(.text+0x2d4): undefined reference to `_intel_fast_memcpy' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(graphcreate.o): In function `MPI_Graph_create': graphcreate.c:(.text+0xbde): undefined reference to `_intel_fast_memcpy' graphcreate.c:(.text+0xc59): undefined reference to `_intel_fast_memcpy' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(topoutil.o): In function `MPIUI_Memcpy': topoutil.c:(.text+0x1562): undefined reference to `_intel_fast_memcpy' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(register_datarep.o): In function `MPI_Register_datarep': register_datarep.c:(.text+0x7d): undefined reference to `__intel_sse2_strlen' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(strfns.o): In function `ADIOI_Strdup': strfns.c:(.text+0xdc): undefined reference to `__intel_sse2_strlen' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(mpio_err.o): In function `MPIO_Err_return_file': mpio_err.c:(.text+0x129): undefined reference to `__intel_sse2_strlen' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(info_delete.o): In function `MPI_Info_delete': info_delete.c:(.text+0x12a): undefined reference to `__intel_sse2_strlen' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(info_get.o): In function `MPI_Info_get': info_get.c:(.text+0x15f): undefined reference to `__intel_sse2_strlen' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(info_getvallen.o):info_getvallen.c:(.text+0x151): more undefined references to `__intel_sse2_strlen' follow /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(simple_pmi.o): In function `PMI_Spawn_multiple': simple_pmi.c:(.text+0x3382): undefined reference to `_intel_fast_memset' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(simple_pmi.o): In function `PMI_Init': simple_pmi.c:(.text+0x4306): undefined reference to `_intel_fast_memcpy' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(segment_ops.o): In function `MPIUI_Memcpy': segment_ops.c:(.text+0x5832): undefined reference to `_intel_fast_memcpy' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(mpid_ext32_segment.o): In function `MPIUI_Memcpy': mpid_ext32_segment.c:(.text+0x3f2): undefined reference to `_intel_fast_memcpy' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(mpid_datatype_contents.o): In function `MPIUI_Memcpy': mpid_datatype_contents.c:(.text+0x5d2): undefined reference to `_intel_fast_memcpy' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(ch3_progress.o): In function `MPIUI_Memcpy': ch3_progress.c:(.text+0x3d12): undefined reference to `_intel_fast_memcpy' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(ch3u_handle_recv_pkt.o):ch3u_handle_recv_pkt.c:(.text+0x5f2): more undefined references to `_intel_fast_memcpy' follow /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(ch3u_rma_sync.o): In function `MPIDI_Win_fence': ch3u_rma_sync.c:(.text+0x1b4): undefined reference to `_intel_fast_memset' ch3u_rma_sync.c:(.text+0x207): undefined reference to `_intel_fast_memset' ch3u_rma_sync.c:(.text+0x2a1): undefined reference to `_intel_fast_memset' ch3u_rma_sync.c:(.text+0x385): undefined reference to `_intel_fast_memset' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(ch3u_rma_sync.o): In function `MPIDI_Win_complete': ch3u_rma_sync.c:(.text+0x2ad8): undefined reference to `_intel_fast_memset' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(ch3u_rma_sync.o):ch3u_rma_sync.c:(.text+0x2b9c): more undefined references to `_intel_fast_memset' follow /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(ch3u_rma_sync.o): In function `MPIUI_Memcpy': ch3u_rma_sync.c:(.text+0x5742): undefined reference to `_intel_fast_memcpy' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(mpid_getpname.o): In function `MPID_Get_processor_name': mpid_getpname.c:(.text+0x5c): undefined reference to `__intel_sse2_strlen' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(mpid_vc.o): In function `MPIDI_Populate_vc_node_ids': mpid_vc.c:(.text+0x100a): undefined reference to `_intel_fast_memset' mpid_vc.c:(.text+0x119c): undefined reference to `_intel_fast_memset' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(mpidi_pg.o): In function `connToStringKVS': mpidi_pg.c:(.text+0x1148): undefined reference to `__intel_sse2_strlen' mpidi_pg.c:(.text+0x1267): undefined reference to `_intel_fast_memcpy' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(mpidi_pg.o): In function `MPIDI_PG_Init': mpidi_pg.c:(.text+0x1fcb): undefined reference to `_intel_fast_memcpy' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(type_struct.o): In function `MPI_Type_struct': type_struct.c:(.text+0x2d6): undefined reference to `_intel_fast_memcpy' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(ad_open.o): In function `ADIO_Open': ad_open.c:(.text+0x4c7): undefined reference to `_intel_fast_memcpy' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(ad_read_coll.o): In function `ADIOI_GEN_ReadStridedColl': ad_read_coll.c:(.text+0x1449): undefined reference to `_intel_fast_memcpy' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(ad_read_coll.o):ad_read_coll.c:(.text+0x149b): more undefined references to `_intel_fast_memcpy' follow /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(cb_config_list.o): In function `ADIOI_cb_config_list_parse': cb_config_list.c:(.text+0x551): undefined reference to `_intel_fast_memset' cb_config_list.c:(.text+0xcc4): undefined reference to `_intel_fast_memset' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(simple_pmiutil.o): In function `PMIU_writeline': simple_pmiutil.c:(.text+0x224): undefined reference to `__intel_sse2_strlen' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(dataloop.o): In function `MPIUI_Memcpy': dataloop.c:(.text+0x192): undefined reference to `_intel_fast_memcpy' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(dataloop_create_blockindexed.o): In function `MPID_Dataloop_create_blockindexed': dataloop_create_blockindexed.c:(.text+0x365): undefined reference to `_intel_fast_memcpy' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(mpid_nem_mpich2.o): In function `MPIUI_Memcpy': mpid_nem_mpich2.c:(.text+0x3f2): undefined reference to `_intel_fast_memcpy' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(mpid_nem_lmt.o): In function `MPIUI_Memcpy': mpid_nem_lmt.c:(.text+0x9b2): undefined reference to `_intel_fast_memcpy' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(mpid_nem_lmt_shm.o): In function `MPID_nem_lmt_shm_start_recv': mpid_nem_lmt_shm.c:(.text+0x9d): undefined reference to `__intel_sse2_strlen' mpid_nem_lmt_shm.c:(.text+0x106): undefined reference to `__intel_sse2_strlen' mpid_nem_lmt_shm.c:(.text+0x13f): undefined reference to `__intel_sse2_strlen' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(mpid_nem_lmt_shm.o): In function `MPID_nem_lmt_shm_start_send': mpid_nem_lmt_shm.c:(.text+0x1545): undefined reference to `__intel_sse2_strlen' mpid_nem_lmt_shm.c:(.text+0x1cf1): undefined reference to `__intel_sse2_strlen' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(mpid_nem_lmt_shm.o): In function `MPIUI_Memcpy': mpid_nem_lmt_shm.c:(.text+0x2d52): undefined reference to `_intel_fast_memcpy' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(tcp_init.o): In function `MPIUI_Memcpy': tcp_init.c:(.text+0x512): undefined reference to `_intel_fast_memcpy' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(socksm.o): In function `state_tc_c_cntd_handler': socksm.c:(.text+0x1698): undefined reference to `__intel_sse2_strlen' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(socksm.o): In function `MPIUI_Memcpy': socksm.c:(.text+0x4922): undefined reference to `_intel_fast_memcpy' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(ch3_isend.o): In function `MPIUI_Memcpy': ch3_isend.c:(.text+0x8a2): undefined reference to `_intel_fast_memcpy' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(ch3_isendv.o): In function `MPIUI_Memcpy': ch3_isendv.c:(.text+0x1ab2): undefined reference to `_intel_fast_memcpy' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(ch3_istartmsg.o): In function `MPIUI_Memcpy': ch3_istartmsg.c:(.text+0x742): undefined reference to `_intel_fast_memcpy' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(ch3_istartmsgv.o): In function `MPIUI_Memcpy': ch3_istartmsgv.c:(.text+0x1982): undefined reference to `_intel_fast_memcpy' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(ch3i_eagernoncontig.o):ch3i_eagernoncontig.c:(.text+0xe32): more undefined references to `_intel_fast_memcpy' follow /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(ch3u_comm_spawn_multiple.o): In function `MPIDI_Comm_spawn_multiple': ch3u_comm_spawn_multiple.c:(.text+0x85d): undefined reference to `_intel_fast_memset' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(type_hindexed.o): In function `MPI_Type_hindexed': type_hindexed.c:(.text+0x2b9): undefined reference to `_intel_fast_memcpy' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(ad_coll_build_req_new.o): In function `ADIOI_Build_agg_reqs': ad_coll_build_req_new.c:(.text+0xd0): undefined reference to `_intel_fast_memset' ad_coll_build_req_new.c:(.text+0x186): undefined reference to `_intel_fast_memset' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(ad_coll_build_req_new.o): In function `ADIOI_Build_client_reqs': ad_coll_build_req_new.c:(.text+0x1bda): undefined reference to `_intel_fast_memset' ad_coll_build_req_new.c:(.text+0x1bef): undefined reference to `_intel_fast_memset' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(ad_coll_build_req_new.o): In function `ADIOI_Build_client_pre_req': ad_coll_build_req_new.c:(.text+0x3ec3): undefined reference to `_intel_fast_memcpy' ad_coll_build_req_new.c:(.text+0x3ee3): undefined reference to `_intel_fast_memcpy' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(ad_coll_build_req_new.o): In function `ADIOI_Build_client_req': ad_coll_build_req_new.c:(.text+0x52a9): undefined reference to `_intel_fast_memcpy' ad_coll_build_req_new.c:(.text+0x52ce): undefined reference to `_intel_fast_memcpy' /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib/libmpich.a(mpid_nem_alloc.o): In function `MPIDI_CH3I_Seg_commit': mpid_nem_alloc.c:(.text+0x709): undefined reference to `__intel_sse2_strlen' collect2: ld returned 1 exit status configure:26595: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "6.0.1" | #define PACKAGE_STRING "ABINIT 6.0.1" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "6.0.1" | #define ABINIT_VERSION "6.0.1" | #define ABINIT_VERSION_MAJOR "6" | #define ABINIT_VERSION_MINOR "0" | #define ABINIT_VERSION_MICRO "1" | #define ABINIT_VERSION_BUILD "20100208" | #define ABINIT_VERSION_BASE "6.0" | #define CC_GNU 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MATH_H 1 | #define HAVE_TERMIOS_H 1 | #define HAVE_ABORT 1 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG 8 | #define SIZEOF_UNSIGNED_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_SIZE_T 8 | #define SIZEOF_PTRDIFF_T 8 | #define CXX_GNU 1 | #define FC_INTEL 1 | #define HAVE_FC_EXIT 1 | #define HAVE_FC_FLUSH 1 | #define HAVE_FC_GET_ENVIRONMENT_VARIABLE 1 | #define HAVE_FC_LONG_LINES 1 | #define HAVE_FC_NULL 1 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define ABINIT_TARGET "x86_64_linux_intel11.1" | /* end confdefs.h. */ | #include "mpi.h" | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | | MPI::Init(); | MPI::Finalize(); | | ; | return 0; | } configure:26817: result: no configure:26823: checking whether the Fortran Compiler supports MPI configure:27047: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpif90 -o conftest -g -extend-source -vec-report0 -i-static -static-libcxa conftest.F90 >&5 ifort: command line remark #10148: option '-static-libcxa' not supported configure:27054: $? = 0 configure:27276: result: yes configure:27285: checking whether MPI is usable configure:27287: result: yes configure:27329: WARNING: disabling MPI I/O is not recommended configure:27334: checking whether to build MPI code configure:27336: result: yes configure:27347: checking whether to build MPI I/O code configure:27349: result: no configure:27359: checking whether to build MPI I/O untested features configure:27361: result: no configure:27371: checking whether to build MPI time tracing code configure:27373: result: no configure:27386: checking which level of MPI is supported by the Fortran compiler configure:27612: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpif90 -o conftest -g -extend-source -vec-report0 -i-static -static-libcxa conftest.F90 >&5 ifort: command line remark #10148: option '-static-libcxa' not supported configure:27619: $? = 0 configure:27842: result: 2 configure:27981: checking whether to use the CUDA Library configure:27983: result: no configure:28039: checking whether to use the FFTW library configure:28041: result: no configure:28068: checking whether to use the GNU Scientific Library configure:28070: result: no configure:28129: applying linear algebra tricks (type: mkl) configure:28151: WARNING: tricks not yet implemented for mkl configure:28164: checking whether to build the LINALG library configure:28166: result: no configure:28193: checking whether to activate ScaLAPACK support configure:28195: result: yes configure:28227: checking whether to use the PAPI library configure:28229: result: no configure:28276: using tarball repository /home/hcg/.abinit/tarballs configure:28304: WARNING: FoX support is not yet operational - volunteers welcome configure:28479: checking whether to enable the FOX plug-in configure:28481: result: no configure:28483: checking whether to build the FOX plug-in configure:28485: result: no configure:28604: checking for a source tarball of NETCDF configure:28609: result: yes configure:28677: applying NetCDF tricks (vendor: intel, version: 11.1) configure:28730: checking whether to enable the NETCDF plug-in configure:28732: result: yes configure:28734: checking whether to build the NETCDF plug-in configure:28736: result: yes configure:28863: checking for a source tarball of ETSF_IO configure:28868: result: yes configure:28926: applying ETSF_IO tricks (vendor: intel, version: 11.1) configure:28943: checking whether to enable the ETSF_IO plug-in configure:28945: result: yes configure:28947: checking whether to build the ETSF_IO plug-in configure:28949: result: yes configure:29156: checking whether to enable the ETSF_IO_TEST plug-in configure:29158: result: no configure:29160: checking whether to build the ETSF_IO_TEST plug-in configure:29162: result: no configure:29274: checking for a source tarball of LIBXC configure:29279: result: yes configure:29329: applying LIBXC tricks configure:29339: checking whether to enable the LIBXC plug-in configure:29341: result: yes configure:29343: checking whether to build the LIBXC plug-in configure:29345: result: yes configure:29456: checking for a source tarball of BIGDFT configure:29461: result: yes configure:29523: applying BigDFT tricks (vendor: intel, version: 11.1) configure:29534: checking whether to enable the BIGDFT plug-in configure:29536: result: yes configure:29538: checking whether to build the BIGDFT plug-in configure:29540: result: yes configure:29649: checking for a source tarball of WANNIER90 configure:29654: result: yes configure:29722: applying Wannier90 tricks (vendor: intel, version: 11.1) configure:29746: checking whether to enable the WANNIER90 plug-in configure:29748: result: yes configure:29750: checking whether to build the WANNIER90 plug-in configure:29752: result: yes configure:29836: checking whether to build Nightly code configure:29838: result: yes configure:29849: checking for ANSI C header files configure:30025: result: yes configure:30036: checking for stdio.h configure:30041: result: yes configure:30188: checking signal.h usability configure:30205: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -c -g -O3 -fschedule-insns2 -march=nocona -mmmx -msse -msse2 -msse3 -mfpmath=sse conftest.c >&5 icc: command line warning #10006: ignoring unknown option '-fschedule-insns2' icc: command line warning #10120: overriding '-marchnocona' with '-msse' icc: command line warning #10120: overriding '-msse' with '-msse3' icc: command line warning #10159: invalid argument for option '-m' configure:30212: $? = 0 configure:30226: result: yes configure:30230: checking signal.h presence configure:30245: /home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -E conftest.c configure:30252: $? = 0 configure:30266: result: yes configure:30299: checking for signal.h configure:30306: result: yes configure:30335: checking timeout for automatic tests configure:30344: result: 900 seconds configure:30387: checking whether to enable bindings configure:30396: result: no configure:30408: checking whether to use C clock for timings configure:30425: result: no configure:30429: checking whether to enable error handlers configure:30438: result: no configure:30457: checking whether to build exports configure:30459: result: no configure:30471: checking whether to enable GW double-precision calculations configure:30480: result: yes configure:30492: checking whether to test abirules configure:30494: result: no configure:30506: checking whether to use macroave configure:30515: result: yes configure:30535: checking whether to read input from stdin configure:30544: result: yes configure:30908: creating ./config.status ## ---------------------- ## ## Running config.status. ## ## ---------------------- ## This file was extended by ABINIT config.status 6.0.1, which was generated by GNU Autoconf 2.63. Invocation command line was CONFIG_FILES = CONFIG_HEADERS = CONFIG_LINKS = CONFIG_COMMANDS = $ ./config.status on hcg config.status:1469: creating config.mk config.status:1469: creating config.dump config.status:1469: creating config.pc config.status:1469: creating config.py config.status:1469: creating config.sh config.status:1469: creating config/wrappers/wrap-fc config.status:1469: creating src/incs/Makefile config.status:1469: creating src/mods/Makefile config.status:1469: creating src/16_hideleave/m_build_info.F90 config.status:1469: creating src/98_main/abinis config.status:1469: creating src/98_main/abinip config.status:1469: creating tests/tests.env config.status:1469: creating tests/tests-install.env config.status:1469: creating Makefile config.status:1469: creating src/Makefile config.status:1469: creating src/01_gsl_ext/Makefile config.status:1469: creating src/01_interfaces_ext/Makefile config.status:1469: creating src/01_macroavnew_ext/Makefile config.status:1469: creating src/10_defs/Makefile config.status:1469: creating src/12_hide_mpi/Makefile config.status:1469: creating src/14_hidewrite/Makefile config.status:1469: creating src/16_hideleave/Makefile config.status:1469: creating src/18_timing/Makefile config.status:1469: creating src/27_toolbox_oop/Makefile config.status:1469: creating src/28_numeric_noabirule/Makefile config.status:1469: creating src/32_contract/Makefile config.status:1469: creating src/32_util/Makefile config.status:1469: creating src/42_geometry/Makefile config.status:1469: creating src/42_nlstrain/Makefile config.status:1469: creating src/42_parser/Makefile config.status:1469: creating src/45_psp_parser/Makefile config.status:1469: creating src/47_xml/Makefile config.status:1469: creating src/49_gw_toolbox_oop/Makefile config.status:1469: creating src/50_abitypes_defs/Makefile config.status:1469: creating src/51_manage_cuda/Makefile config.status:1469: creating src/51_manage_mpi/Makefile config.status:1469: creating src/52_fft_mpi_noabirule/Makefile config.status:1469: creating src/53_abiutil/Makefile config.status:1469: creating src/53_ffts/Makefile config.status:1469: creating src/53_spacepar/Makefile config.status:1469: creating src/56_recipspace/Makefile config.status:1469: creating src/56_xc/Makefile config.status:1469: creating src/57_iovars/Makefile config.status:1469: creating src/59_io_mpi/Makefile config.status:1469: creating src/61_ionetcdf/Makefile config.status:1469: creating src/62_cg_noabirule/Makefile config.status:1469: creating src/62_iowfdenpot/Makefile config.status:1469: creating src/62_occeig/Makefile config.status:1469: creating src/62_poisson/Makefile config.status:1469: creating src/62_wvl_wfs/Makefile config.status:1469: creating src/63_bader/Makefile config.status:1469: creating src/64_atompaw/Makefile config.status:1469: creating src/65_nonlocal/Makefile config.status:1469: creating src/65_psp/Makefile config.status:1469: creating src/66_paw/Makefile config.status:1469: creating src/66_wfs/Makefile config.status:1469: creating src/67_common/Makefile config.status:1469: creating src/68_dmft/Makefile config.status:1469: creating src/68_gw/Makefile config.status:1469: creating src/68_recursion/Makefile config.status:1469: creating src/68_rsprc/Makefile config.status:1469: creating src/69_bse/Makefile config.status:1469: creating src/72_geomoptim/Makefile config.status:1469: creating src/72_response/Makefile config.status:1469: creating src/77_ddb/Makefile config.status:1469: creating src/77_lwf/Makefile config.status:1469: creating src/77_suscep/Makefile config.status:1469: creating src/79_seqpar_mpi/Makefile config.status:1469: creating src/83_cut3d/Makefile config.status:1469: creating src/93_rdm/Makefile config.status:1469: creating src/95_drive/Makefile config.status:1469: creating src/98_main/Makefile config.status:1469: creating src/libs/Makefile config.status:1469: creating tests/Nightly/Makefile config.status:1469: creating prereqs/Makefile config.status:1469: creating prereqs/linalg/Makefile config.status:1469: creating plugins/Makefile config.status:1469: creating plugins/bigdft/Makefile config.status:1469: creating plugins/etsf_io/Makefile config.status:1469: creating plugins/etsf_io_test/Makefile config.status:1469: creating plugins/fox/Makefile config.status:1469: creating plugins/libxc/Makefile config.status:1469: creating plugins/netcdf/Makefile config.status:1469: creating plugins/wannier90/Makefile config.status:1469: creating bindings/Makefile config.status:1469: creating bindings/parser/Makefile config.status:1469: creating doc/Makefile config.status:1469: creating tests/Makefile config.status:1469: creating config.h config.status:1743: executing depfiles commands config.status:1743: executing script-perms commands ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_build=x86_64-unknown-linux-gnu ac_cv_c_bigendian=no ac_cv_c_compiler_gnu=yes ac_cv_c_const=yes ac_cv_cxx_compiler_gnu=yes ac_cv_env_ARFLAGS_EXTRA_set= ac_cv_env_ARFLAGS_EXTRA_value= ac_cv_env_CCC_set= ac_cv_env_CCC_value= ac_cv_env_CC_LDFLAGS_set= ac_cv_env_CC_LDFLAGS_value= ac_cv_env_CC_LIBS_set= ac_cv_env_CC_LIBS_value= ac_cv_env_CC_set= ac_cv_env_CC_value= ac_cv_env_CFLAGS_EXTRA_set= ac_cv_env_CFLAGS_EXTRA_value= ac_cv_env_CFLAGS_set= ac_cv_env_CFLAGS_value= ac_cv_env_CPPFLAGS_EXTRA_set= ac_cv_env_CPPFLAGS_EXTRA_value= ac_cv_env_CPPFLAGS_set= ac_cv_env_CPPFLAGS_value= ac_cv_env_CPP_set= ac_cv_env_CPP_value= ac_cv_env_CXXFLAGS_EXTRA_set= ac_cv_env_CXXFLAGS_EXTRA_value= ac_cv_env_CXXFLAGS_set= ac_cv_env_CXXFLAGS_value= ac_cv_env_CXX_LDFLAGS_EXTRA_set= ac_cv_env_CXX_LDFLAGS_EXTRA_value= ac_cv_env_CXX_LDFLAGS_set= ac_cv_env_CXX_LDFLAGS_value= ac_cv_env_CXX_LIBS_set= ac_cv_env_CXX_LIBS_value= ac_cv_env_CXX_set= ac_cv_env_CXX_value= ac_cv_env_FCFLAGS_EXTRA_set= ac_cv_env_FCFLAGS_EXTRA_value= ac_cv_env_FCFLAGS_set= ac_cv_env_FCFLAGS_value= ac_cv_env_FC_LDFLAGS_EXTRA_set= ac_cv_env_FC_LDFLAGS_EXTRA_value= ac_cv_env_FC_LDFLAGS_set= ac_cv_env_FC_LDFLAGS_value= ac_cv_env_FC_LIBS_set= ac_cv_env_FC_LIBS_value= ac_cv_env_FC_set= ac_cv_env_FC_value= ac_cv_env_FPPFLAGS_set= ac_cv_env_FPPFLAGS_value= ac_cv_env_FPP_set= ac_cv_env_FPP_value= ac_cv_env_LDFLAGS_set= ac_cv_env_LDFLAGS_value= ac_cv_env_LIBS_set= ac_cv_env_LIBS_value= ac_cv_env_MPI_RUNNER_set= ac_cv_env_MPI_RUNNER_value= ac_cv_env_XPPFLAGS_set= ac_cv_env_XPPFLAGS_value= ac_cv_env_XPP_set= ac_cv_env_XPP_value= ac_cv_env_build_alias_set= ac_cv_env_build_alias_value= ac_cv_env_host_alias_set= ac_cv_env_host_alias_value= ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_fc_compiler_gnu=no ac_cv_fc_dummy_main=none ac_cv_fc_libs=' -L/home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib -lmpichf90 -lmpich -lopa -lpthread -lrt -L/opt/intel/Compiler/11.1/056/lib/intel64 -L/opt/intel/Compiler/11.1/056/ipp/em64t/lib -L/opt/intel/Compiler/11.1/056/mkl/lib/em64t -L/opt/intel/Compiler/11.1/056/tbb/intel64/cc4.1.0_libc2.4_kernel2.6.16.21/lib -L/opt/intel/Compiler/11.1/059/lib/intel64 -L/opt/intel/Compiler/11.1/059/mkl/lib/em64t -L/usr/lib64/gcc/x86_64-suse-linux/4.3 -L/usr/lib64/gcc/x86_64-suse-linux/4.3/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-suse-linux/4.3/../../../../x86_64-suse-linux/lib -L/usr/lib64/gcc/x86_64-suse-linux/4.3/../../.. -L/lib64 -L/lib -L/usr/lib64 -L/usr/lib -lifport -lifcore -limf -lsvml -lm -lipgo -lirc -lirc_s -ldl' ac_cv_fc_mangling='lower case, underscore, no extra underscore' ac_cv_fc_srcext_F90=none ac_cv_fortran_dummy_main=none ac_cv_func_abort=yes ac_cv_header_inttypes_h=yes ac_cv_header_malloc_h=yes ac_cv_header_math_h=yes ac_cv_header_memory_h=yes ac_cv_header_numarray_arrayobject_h=no ac_cv_header_signal_h=yes ac_cv_header_stdarg_h=yes ac_cv_header_stdc=yes ac_cv_header_stddef_h=yes ac_cv_header_stdint_h=yes ac_cv_header_stdio_h=yes ac_cv_header_stdlib_h=yes ac_cv_header_string_h=yes ac_cv_header_strings_h=yes ac_cv_header_sys_stat_h=yes ac_cv_header_sys_types_h=yes ac_cv_header_termios_h=yes ac_cv_header_unistd_h=yes ac_cv_host=x86_64-unknown-linux-gnu ac_cv_objext=o ac_cv_path_BOURNE_SHELL=/usr/bin/sh ac_cv_path_DVI2PDF=/usr/bin/dvipdf ac_cv_path_DVI2PS=/bin/false ac_cv_path_EGREP='/usr/bin/grep -E' ac_cv_path_GREP=/usr/bin/grep ac_cv_path_LATEX=/bin/false ac_cv_path_MV=/bin/mv ac_cv_path_PERL=/usr/bin/perl ac_cv_path_PS2PDF=/usr/bin/ps2pdf ac_cv_path_RM=/bin/rm ac_cv_path_SED=/usr/bin/sed ac_cv_path_TAR=/bin/tar ac_cv_path_WGET=/usr/bin/wget ac_cv_path_install='/usr/bin/install -c' ac_cv_path_mkdir=/bin/mkdir ac_cv_prog_AR=ar ac_cv_prog_AWK=gawk ac_cv_prog_CPP='/home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -E' ac_cv_prog_PYTHON=python ac_cv_prog_PYTHON_CONFIG=python-config ac_cv_prog_TRUE_CPP=cpp ac_cv_prog_ac_ct_CC=/home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc ac_cv_prog_ac_ct_RANLIB=ranlib ac_cv_prog_cc_c89= ac_cv_prog_cc_g=yes ac_cv_prog_cxx_g=yes ac_cv_prog_fc_g=yes ac_cv_prog_fc_v=-v ac_cv_prog_make_make_set=yes ac_cv_sizeof_double=8 ac_cv_sizeof_float=4 ac_cv_sizeof_int=4 ac_cv_sizeof_long=8 ac_cv_sizeof_long_long=8 ac_cv_sizeof_ptrdiff_t=8 ac_cv_sizeof_size_t=8 ac_cv_sizeof_unsigned_int=4 ac_cv_sizeof_unsigned_long=8 ac_cv_sizeof_unsigned_long_long=8 ac_cv_target=x86_64-unknown-linux-gnu ac_cv_type_size_t=yes am_cv_CC_dependencies_compiler_type=gcc3 am_cv_CXX_dependencies_compiler_type=gcc3 ax_cv_f90_modext=mod ## ----------------- ## ## Output variables. ## ## ----------------- ## ABINIT_BINARY_PACKAGE='abinit-6.0.1_x86_64_linux_intel11.1' ABINIT_TARGET='x86_64_linux_intel11.1' ABINIT_VERSION='6.0.1' ABINIT_VERSION_BASE='6.0' ABINIT_VERSION_BUILD='20100208' ABINIT_VERSION_MAJOR='6' ABINIT_VERSION_MICRO='1' ABINIT_VERSION_MINOR='0' ACLOCAL='${SHELL} /home/hcg/Desktop/DESKTOP_sonu/CODES/ab-init/abinit-6.0.1/config/gnu/missing --run aclocal-1.11' AMDEPBACKSLASH='\' AMDEP_FALSE='#' AMDEP_TRUE='' AMTAR='${SHELL} /home/hcg/Desktop/DESKTOP_sonu/CODES/ab-init/abinit-6.0.1/config/gnu/missing --run tar' AR='ar' ARFLAGS=' rc' ARFLAGS_64BITS='' ARFLAGS_CMD='rc' ARFLAGS_DEBUG=' ' ARFLAGS_EXTRA='' ARFLAGS_HINTS='' ARFLAGS_OPT='' AUTOCONF='${SHELL} /home/hcg/Desktop/DESKTOP_sonu/CODES/ab-init/abinit-6.0.1/config/gnu/missing --run autoconf' AUTOHEADER='${SHELL} /home/hcg/Desktop/DESKTOP_sonu/CODES/ab-init/abinit-6.0.1/config/gnu/missing --run autoheader' AUTOMAKE='${SHELL} /home/hcg/Desktop/DESKTOP_sonu/CODES/ab-init/abinit-6.0.1/config/gnu/missing --run automake-1.11' AWK='gawk' BAZAAR='' BOURNE_SHELL='/usr/bin/sh' CC='/home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc' CCDEPMODE='depmode=gcc3' CC_LDFLAGS=' ' CC_LDFLAGS_64BITS='' CC_LDFLAGS_CUDA='' CC_LDFLAGS_DEBUG=' ' CC_LDFLAGS_EXTRA='' CC_LDFLAGS_HINTS='' CC_LDFLAGS_OPT='' CC_LIBS=' ' CC_LIBS_64BITS='' CC_LIBS_CUDA='' CC_LIBS_DEBUG=' ' CC_LIBS_EXTRA='' CC_LIBS_HINTS='' CC_LIBS_OPT='' CFGFLAGS_BIGDFT=' --disable-binaries --disable-libabinit --enable-libpoissonsolver' CFGFLAGS_ETSF_IO='' CFGFLAGS_ETSF_IO_TEST='' CFGFLAGS_FOX='' CFGFLAGS_LIBXC='--enable-fortran' CFGFLAGS_NETCDF=' --disable-cxx' CFGFLAGS_WANNIER90='' CFLAGS=' -g -O3 -fschedule-insns2 -march=nocona -mmmx -msse -msse2 -msse3 -mfpmath=sse ' CFLAGS_64BITS='' CFLAGS_BIGDFT=' -g -O3 -fschedule-insns2 -march=nocona -mmmx -msse -msse2 -msse3 -mfpmath=sse ' CFLAGS_CUDA='' CFLAGS_DEBUG='-g ' CFLAGS_ETSF_IO=' -g -O3 -fschedule-insns2 -march=nocona -mmmx -msse -msse2 -msse3 -mfpmath=sse ' CFLAGS_ETSF_IO_TEST=' -g -O3 -fschedule-insns2 -march=nocona -mmmx -msse -msse2 -msse3 -mfpmath=sse ' CFLAGS_EXTRA='' CFLAGS_FOX=' -g -O3 -fschedule-insns2 -march=nocona -mmmx -msse -msse2 -msse3 -mfpmath=sse ' CFLAGS_HINTS='' CFLAGS_LIBXC=' -g -O3 -fschedule-insns2 -march=nocona -mmmx -msse -msse2 -msse3 -mfpmath=sse ' CFLAGS_LINALG=' -g -O3 -fschedule-insns2 -march=nocona -mmmx -msse -msse2 -msse3 -mfpmath=sse ' CFLAGS_NETCDF=' -g -O3 -fschedule-insns2 -march=nocona -mmmx -msse -msse2 -msse3 -mfpmath=sse ' CFLAGS_OPT='-O3 -fschedule-insns2 -march=nocona -mmmx -msse -msse2 -msse3 -mfpmath=sse' CFLAGS_WANNIER90=' -g -O3 -fschedule-insns2 -march=nocona -mmmx -msse -msse2 -msse3 -mfpmath=sse ' CPP='/home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc -E' CPPFLAGS=' ' CPPFLAGS_64BITS='' CPPFLAGS_BIGDFT='' CPPFLAGS_CUDA='' CPPFLAGS_DEBUG=' ' CPPFLAGS_ETSF_IO='' CPPFLAGS_ETSF_IO_TEST='' CPPFLAGS_EXTRA='' CPPFLAGS_FOX='' CPPFLAGS_HINTS=' ' CPPFLAGS_LIBXC='' CPPFLAGS_LINALG=' ' CPPFLAGS_NETCDF=' -DNDEBUG -DpgiFortran' CPPFLAGS_OPT='' CPPFLAGS_WANNIER90='' CXX='/home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicxx' CXXDEPMODE='depmode=gcc3' CXXFLAGS=' -g -O3 -fschedule-insns2 -march=nocona -mmmx -msse -msse2 -msse3 -mfpmath=sse ' CXXFLAGS_64BITS='' CXXFLAGS_BIGDFT=' -g -O3 -fschedule-insns2 -march=nocona -mmmx -msse -msse2 -msse3 -mfpmath=sse ' CXXFLAGS_CUDA='' CXXFLAGS_DEBUG='-g ' CXXFLAGS_ETSF_IO=' -g -O3 -fschedule-insns2 -march=nocona -mmmx -msse -msse2 -msse3 -mfpmath=sse ' CXXFLAGS_ETSF_IO_TEST=' -g -O3 -fschedule-insns2 -march=nocona -mmmx -msse -msse2 -msse3 -mfpmath=sse ' CXXFLAGS_EXTRA='' CXXFLAGS_FOX=' -g -O3 -fschedule-insns2 -march=nocona -mmmx -msse -msse2 -msse3 -mfpmath=sse ' CXXFLAGS_HINTS='' CXXFLAGS_LIBXC=' -g -O3 -fschedule-insns2 -march=nocona -mmmx -msse -msse2 -msse3 -mfpmath=sse ' CXXFLAGS_LINALG=' -g -O3 -fschedule-insns2 -march=nocona -mmmx -msse -msse2 -msse3 -mfpmath=sse ' CXXFLAGS_NETCDF=' -g -O3 -fschedule-insns2 -march=nocona -mmmx -msse -msse2 -msse3 -mfpmath=sse ' CXXFLAGS_OPT='-O3 -fschedule-insns2 -march=nocona -mmmx -msse -msse2 -msse3 -mfpmath=sse' CXXFLAGS_WANNIER90=' -g -O3 -fschedule-insns2 -march=nocona -mmmx -msse -msse2 -msse3 -mfpmath=sse ' CXX_LDFLAGS=' ' CXX_LDFLAGS_64BITS='' CXX_LDFLAGS_CUDA='' CXX_LDFLAGS_DEBUG=' ' CXX_LDFLAGS_EXTRA='' CXX_LDFLAGS_HINTS='' CXX_LDFLAGS_OPT='' CXX_LIBS=' ' CXX_LIBS_64BITS='' CXX_LIBS_CUDA='' CXX_LIBS_DEBUG=' ' CXX_LIBS_EXTRA='' CXX_LIBS_HINTS='' CXX_LIBS_OPT='' CYGPATH_W='echo' DEFS='-DHAVE_CONFIG_H' DEPDIR='.deps' DO_BUILD_01_GSL_EXT_FALSE='' DO_BUILD_01_GSL_EXT_TRUE='#' DO_BUILD_01_MACROAVNEW_EXT_FALSE='#' DO_BUILD_01_MACROAVNEW_EXT_TRUE='' DO_BUILD_51_MANAGE_CUDA_FALSE='' DO_BUILD_51_MANAGE_CUDA_TRUE='#' DO_BUILD_BIGDFT_FALSE='#' DO_BUILD_BIGDFT_TRUE='' DO_BUILD_BINDINGS_FALSE='' DO_BUILD_BINDINGS_TRUE='#' DO_BUILD_CCLOCK_FALSE='' DO_BUILD_CCLOCK_TRUE='#' DO_BUILD_ERROR_HANDLERS_FALSE='' DO_BUILD_ERROR_HANDLERS_TRUE='#' DO_BUILD_ETSF_IO_FALSE='#' DO_BUILD_ETSF_IO_TEST_FALSE='' DO_BUILD_ETSF_IO_TEST_TRUE='#' DO_BUILD_ETSF_IO_TRUE='' DO_BUILD_EXPORTS_FALSE='' DO_BUILD_EXPORTS_TRUE='#' DO_BUILD_FOX_FALSE='' DO_BUILD_FOX_TRUE='#' DO_BUILD_LIBXC_FALSE='#' DO_BUILD_LIBXC_TRUE='' DO_BUILD_LINALG_FALSE='' DO_BUILD_LINALG_TRUE='#' DO_BUILD_MACROAVE_FALSE='#' DO_BUILD_MACROAVE_TRUE='' DO_BUILD_NETCDF_FALSE='#' DO_BUILD_NETCDF_TRUE='' DO_BUILD_NIGHTLY_FALSE='#' DO_BUILD_NIGHTLY_TRUE='' DO_BUILD_WANNIER90_FALSE='#' DO_BUILD_WANNIER90_TRUE='' DO_ENABLE_BIGDFT_FALSE='#' DO_ENABLE_BIGDFT_TRUE='' DO_ENABLE_ETSF_IO_FALSE='#' DO_ENABLE_ETSF_IO_TEST_FALSE='' DO_ENABLE_ETSF_IO_TEST_TRUE='#' DO_ENABLE_ETSF_IO_TRUE='' DO_ENABLE_FOX_FALSE='' DO_ENABLE_FOX_TRUE='#' DO_ENABLE_LIBXC_FALSE='#' DO_ENABLE_LIBXC_TRUE='' DO_ENABLE_MPI_FALSE='#' DO_ENABLE_MPI_TRUE='' DO_ENABLE_NETCDF_FALSE='#' DO_ENABLE_NETCDF_TRUE='' DO_ENABLE_WANNIER90_FALSE='#' DO_ENABLE_WANNIER90_TRUE='' DO_TEST_ABIRULES_FALSE='' DO_TEST_ABIRULES_TRUE='#' DO_TEST_GWDP_FALSE='#' DO_TEST_GWDP_TRUE='' DVI2PDF='/usr/bin/dvipdf' DVI2PS='/bin/false' ECHO_C='' ECHO_N='-n' ECHO_T='' EGREP='/usr/bin/grep -E' EXEEXT='' F77='/home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpif90' FC='/home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpif90' FCFLAGS=' -g -extend-source -vec-report0 ' FCFLAGS_64BITS='' FCFLAGS_BIGDFT=' -g -extend-source -vec-report0 -O2' FCFLAGS_DEBUG='-g ' FCFLAGS_ETSF_IO=' -g -extend-source -vec-report0 -O2' FCFLAGS_ETSF_IO_TEST=' -g -extend-source -vec-report0 -O2' FCFLAGS_EXTRA='' FCFLAGS_F90='' FCFLAGS_FIXEDFORM='-fixed' FCFLAGS_FOX=' -g -extend-source -vec-report0 -O2' FCFLAGS_FREEFORM='-free' FCFLAGS_HINTS='-extend-source -vec-report0' FCFLAGS_LIBXC=' -g -extend-source -vec-report0 -O2' FCFLAGS_LINALG=' -g -extend-source -vec-report0 -O2' FCFLAGS_MODDIR='-module $(abinit_moddir)' FCFLAGS_NETCDF=' -g -extend-source -vec-report0 -O2 -ip -no-prec-div' FCFLAGS_OPT='-O2' FCFLAGS_WANNIER90=' -g -extend-source -vec-report0 -O2' FCLIBS=' -L/home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/lib -lmpichf90 -lmpich -lopa -lpthread -lrt -L/opt/intel/Compiler/11.1/056/lib/intel64 -L/opt/intel/Compiler/11.1/056/ipp/em64t/lib -L/opt/intel/Compiler/11.1/056/mkl/lib/em64t -L/opt/intel/Compiler/11.1/056/tbb/intel64/cc4.1.0_libc2.4_kernel2.6.16.21/lib -L/opt/intel/Compiler/11.1/059/lib/intel64 -L/opt/intel/Compiler/11.1/059/mkl/lib/em64t -L/usr/lib64/gcc/x86_64-suse-linux/4.3 -L/usr/lib64/gcc/x86_64-suse-linux/4.3/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-suse-linux/4.3/../../../../x86_64-suse-linux/lib -L/usr/lib64/gcc/x86_64-suse-linux/4.3/../../.. -L/lib64 -L/lib -L/usr/lib64 -L/usr/lib -lifport -lifcore -limf -lsvml -lm -lipgo -lirc -lirc_s -ldl' FCLIBS_ETSF_IO='$(FCLIBS)' FCLIBS_ETSF_IO_TEST='' FCLIBS_FOX='' FCLIBS_NETCDF='$(FCLIBS)' FCLIBS_WANNIER90='$(FCLIBS) -lsvml' FC_LDFLAGS=' -i-static -static-libcxa ' FC_LDFLAGS_64BITS='' FC_LDFLAGS_DEBUG=' ' FC_LDFLAGS_EXTRA='' FC_LDFLAGS_HINTS='-i-static -static-libcxa' FC_LDFLAGS_OPT='' FC_LIBS=' ' FC_LIBS_64BITS='' FC_LIBS_DEBUG=' ' FC_LIBS_EXTRA='' FC_LIBS_HINTS='' FC_LIBS_OPT='' FC_NOWRAP='/home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpif90' FFLAGS=' -g -extend-source -vec-report0 ' FPP='' FPPFLAGS='' GREP='/usr/bin/grep' INSTALL_DATA='${INSTALL} -m 644' INSTALL_PROGRAM='${INSTALL}' INSTALL_SCRIPT='${INSTALL}' INSTALL_STRIP_PROGRAM='$(install_sh) -c -s' LATEX='/bin/false' LDFLAGS=' -i-static -static-libcxa ' LIBOBJS='' LIBS=' ' LN_S='ln -s' LTLIBOBJS='' LTXFLAGS='' MAKEINFO='${SHELL} /home/hcg/Desktop/DESKTOP_sonu/CODES/ab-init/abinit-6.0.1/config/gnu/missing --run makeinfo' MARKDOWN='/usr/bin/perl /home/hcg/Desktop/DESKTOP_sonu/CODES/ab-init/abinit-6.0.1/util/developers/markdown.pl' MDFLAGS='' MKDIR_P='/bin/mkdir -p' MODEXT='mod' MPI_RUNNER='/home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpirun' MV='/bin/mv' NVCC='' NVCC_CFLAGS='' NVCC_CPPFLAGS='' NVCC_LDFLAGS='' NVCC_LIBS='' OBJEXT='o' PACKAGE='abinit' PACKAGE_BUGREPORT='https://bugs.launchpad.net/abinit/' PACKAGE_NAME='ABINIT' PACKAGE_STRING='ABINIT 6.0.1' PACKAGE_TARNAME='abinit' PACKAGE_VERSION='6.0.1' PATH_SEPARATOR=':' PDFFLAGS='' PERL='/usr/bin/perl' PS2PDF='/usr/bin/ps2pdf' PYTHON='python' PYTHON_CONFIG='python-config' PYTHON_CPPFLAGS='-I/usr/include/python2.6 -I/usr/include/python2.6' RANLIB='ranlib' RM='/bin/rm' SED='/usr/bin/sed' SET_MAKE='' SHELL='/bin/sh' STRIP='' TAR='/bin/tar' TRUE_CPP='cpp' TRUE_CPPFLAGS=' -P -std=c89' VERSION='6.0.1' WGET='/usr/bin/wget' XPP='' XPPFLAGS='' abi_ac_version='026300' abi_am_version='011100' abi_cc_path='' abi_cc_vendor='gnu' abi_cc_version='' abi_cpp_path='' abi_cpu_64bits='yes' abi_cpu_bits='64' abi_cpu_model='xeon' abi_cpu_spec='intel_xeon' abi_cpu_vendor='intel' abi_cxx_path='' abi_cxx_vendor='gnu' abi_cxx_version='4.3' abi_fc_path='' abi_fc_vendor='intel' abi_fc_version='11.1' abi_fc_wrap='no' abi_fpp_path='' abi_lt_version='020204' abi_m4_version='010413' abi_mpi_runner_works='' abi_sys_spec='linux-x86_64' abinit_bindir='/home/hcg/Desktop/DESKTOP_sonu/CODES/ab-init/abinit-6.0.1/ABINIT/abinit/6.0/bin' abinit_builddir='/home/hcg/Desktop/DESKTOP_sonu/CODES/ab-init/abinit-6.0.1' abinit_chkdir='/home/hcg/Desktop/DESKTOP_sonu/CODES/ab-init/abinit-6.0.1/ABINIT/abinit/6.0/tests' abinit_datdir='/home/hcg/Desktop/DESKTOP_sonu/CODES/ab-init/abinit-6.0.1/ABINIT/abinit' abinit_docdir='/home/hcg/Desktop/DESKTOP_sonu/CODES/ab-init/abinit-6.0.1/ABINIT/abinit/6.0/doc' abinit_incdir='/home/hcg/Desktop/DESKTOP_sonu/CODES/ab-init/abinit-6.0.1/ABINIT/abinit/6.0/include' abinit_libdir='/home/hcg/Desktop/DESKTOP_sonu/CODES/ab-init/abinit-6.0.1/ABINIT/abinit/6.0/lib' abinit_mandir='/home/hcg/Desktop/DESKTOP_sonu/CODES/ab-init/abinit-6.0.1/ABINIT/abinit/man' abinit_moddir='/home/hcg/Desktop/DESKTOP_sonu/CODES/ab-init/abinit-6.0.1/src/mods' abinit_prefix='/home/hcg/Desktop/DESKTOP_sonu/CODES/ab-init/abinit-6.0.1/ABINIT' abinit_rundir='/home/hcg/Desktop/DESKTOP_sonu/CODES/ab-init/abinit-6.0.1/ABINIT/abinit/bin' abinit_srcdir='/home/hcg/Desktop/DESKTOP_sonu/CODES/ab-init/abinit-6.0.1' abinit_tardir='/home/hcg/.abinit/tarballs' abinit_wwwdir='/home/hcg/Desktop/DESKTOP_sonu/CODES/ab-init/abinit-6.0.1/ABINIT/abinit/6.0/www' ac_ct_CC='/home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install/bin/mpicc' ac_ct_CXX='' ac_ct_FC='' am__EXEEXT_FALSE='' am__EXEEXT_TRUE='#' am__fastdepCC_FALSE='#' am__fastdepCC_TRUE='' am__fastdepCXX_FALSE='#' am__fastdepCXX_TRUE='' am__include='include' am__isrc='' am__leading_dot='.' am__quote='' am__tar='${AMTAR} chof - "$$tardir"' am__untar='${AMTAR} xf -' bigdft_pkg_name='bigdft-1.2.0.2' bigdft_pkg_string='BigDFT library 1.2.0.2 (upstream release)' bindir='${exec_prefix}/bin' build='x86_64-unknown-linux-gnu' build_alias='' build_bigdft='yes' build_cpu='x86_64' build_etsf_io='yes' build_etsf_io_test='no' build_fox='no' build_libxc='yes' build_linalg='no' build_netcdf='yes' build_os='linux-gnu' build_vendor='unknown' build_wannier90='yes' bzr_branch='' bzr_clean='' bzr_revno='' datadir='${datarootdir}' datarootdir='${prefix}/share' docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' dvidir='${docdir}' enable_64bit_flags='no' enable_all_plugins='yes' enable_bigdft='yes' enable_bindings='no' enable_cclock='no' enable_config_file='yes' enable_cuda='no' enable_debug='yes' enable_env_file='no' enable_error_handlers='no' enable_etsf_io='yes' enable_etsf_io_test='no' enable_exports='no' enable_fc_wrapper='no' enable_fftw='no' enable_fftw_threads='no' enable_fox='no' enable_gsl='no' enable_gw_dpc='yes' enable_hints='yes' enable_libxc='yes' enable_macroave='yes' enable_mpi='yes' enable_mpi_io='no' enable_mpi_io_test='no' enable_mpi_trace='no' enable_netcdf='yes' enable_nightly='yes' enable_optim='standard' enable_papi='no' enable_scalapack='yes' enable_shared='' enable_static='' enable_stdin='yes' enable_wannier90='yes' etsf_io_pkg_name='etsf_io-1.0.2' etsf_io_pkg_string='ETSF I/O library 1.0.2 (upstream release)' 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fcflags_opt_netcdf='-O2' fcflags_opt_wannier90='-O2' fox_pkg_name='FoX-4.0.3' fox_pkg_string='FoX Fortran XML library 4.0.3 (upstream release)' host='x86_64-unknown-linux-gnu' host_alias='' host_cpu='x86_64' host_os='linux-gnu' host_vendor='unknown' htmldir='${docdir}' includedir='${prefix}/include' infodir='${datarootdir}/info' install_sh='${SHELL} /home/hcg/Desktop/DESKTOP_sonu/CODES/ab-init/abinit-6.0.1/config/gnu/install-sh' lib_bigdft_incs='-I$(abinit_builddir)/plugins/bigdft' lib_bigdft_libs='-L$(abinit_builddir)/plugins/bigdft -lbigdft -lpoissonsolver' lib_cuda_incs='' lib_cuda_libs='' lib_etsf_io_incs='-I$(abinit_builddir)/plugins/etsf_io' lib_etsf_io_libs='-L$(abinit_builddir)/plugins/etsf_io -letsf_io_low_level -letsf_io_utils -letsf_io' lib_etsf_io_test_incs='' lib_etsf_io_test_libs='' lib_fft_incs='' lib_fft_libs='' lib_fox_incs='' lib_fox_libs='' lib_gsl_incs='' lib_gsl_libs='' lib_libxc_incs='-I$(abinit_builddir)/plugins/libxc' 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src_77_suscep_incs='-I$(top_builddir)/src/77_suscep -I$(top_srcdir)/src/77_suscep' src_79_seqpar_mpi_incs='-I$(top_builddir)/src/79_seqpar_mpi -I$(top_srcdir)/src/79_seqpar_mpi' src_83_cut3d_incs='-I$(top_builddir)/src/83_cut3d -I$(top_srcdir)/src/83_cut3d' src_93_rdm_incs='-I$(top_builddir)/src/93_rdm -I$(top_srcdir)/src/93_rdm' src_95_drive_incs='-I$(top_builddir)/src/95_drive -I$(top_srcdir)/src/95_drive' src_incs_incs='-I$(top_builddir)/src/incs -I$(top_srcdir)/src/incs' src_mods_incs='-I$(top_builddir)/src/mods -I$(top_srcdir)/src/mods' sysconfdir='${prefix}/etc' target='x86_64-unknown-linux-gnu' target_alias='' target_cpu='x86_64' target_os='linux-gnu' target_vendor='unknown' wannier90_pkg_name='wannier90-1.1' wannier90_pkg_string='Wannier90 program 1.1 (upstream release)' with_64bit_flags='' with_ar_dbgflags='' with_ar_optflags='' with_bigdft_includes='' with_bigdft_libs='' with_cc_dbgflags='' with_cc_ld_dbgflags='' with_cc_ld_dbglibs='' with_cc_ld_optflags='' with_cc_ld_optlibs='' with_cc_optflags='-O2' with_config_file='' with_cpp_dbgflags='' with_cpp_optflags='' with_cuda_includes='' with_cuda_libs='' with_cxx_dbgflags='' with_cxx_ld_dbgflags='' with_cxx_ld_dbglibs='' with_cxx_ld_optflags='' with_cxx_ld_optlibs='' with_cxx_optflags='-O2' with_etsf_io_includes='' with_etsf_io_libs='' with_etsf_io_test_includes='' with_etsf_io_test_libs='' with_fc_dbgflags='' with_fc_ld_dbgflags='' with_fc_ld_dbglibs='' with_fc_ld_optflags='' with_fc_ld_optlibs='' with_fc_optflags='-O2' with_fc_vendor='' with_fc_version='' with_fftw_includes='' with_fftw_libs='' with_fox_includes='' with_fox_libs='' with_gnu_ld='' with_gsl_includes='' with_gsl_libs='' with_libxc_includes='' with_libxc_libs='' with_linalg_includes='' with_linalg_libs='-L/opt/intel/Compiler/11.1/056/mkl/lib/em64t -lmkl_intel_lp64 -lmkl_sequential -lmkl_core' with_linalg_type='mkl' with_mpi_includes='' with_mpi_level='' with_mpi_libs='' with_mpi_prefix='/home/hcg/Desktop/intel_fortran_plus_math_lib_mpi_sonu/MPI/mpich2-install' with_mpi_runner='' with_netcdf_includes='' with_netcdf_libs='' with_papi_includes='' with_papi_libs='' with_plugins_prefix='' with_plugins_tardir='' with_scalapack_includes='-I/opt/intel/Compiler/11.1/056/mkl/include' with_scalapack_libs='-L/opt/intel/Compiler/11.1/056/mkl/lib/em64t -lmkl_scalapack_lp64 -lmkl_blacs_lp64' with_timeout='900' with_wannier90='' with_wannier90_includes='' with_wannier90_libs='' ## ----------- ## ## confdefs.h. ## ## ----------- ## #define PACKAGE_NAME "ABINIT" #define PACKAGE_TARNAME "abinit" #define PACKAGE_VERSION "6.0.1" #define PACKAGE_STRING "ABINIT 6.0.1" #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" #define PACKAGE "abinit" #define VERSION "6.0.1" #define ABINIT_VERSION "6.0.1" #define ABINIT_VERSION_MAJOR "6" #define ABINIT_VERSION_MINOR "0" #define ABINIT_VERSION_MICRO "1" #define ABINIT_VERSION_BUILD "20100208" #define ABINIT_VERSION_BASE "6.0" #define CC_GNU 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_MEMORY_H 1 #define HAVE_STRINGS_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_UNISTD_H 1 #define STDC_HEADERS 1 #define HAVE_STDDEF_H 1 #define HAVE_STDARG_H 1 #define HAVE_STDIO_H 1 #define HAVE_MALLOC_H 1 #define HAVE_MATH_H 1 #define HAVE_TERMIOS_H 1 #define HAVE_ABORT 1 #define SIZEOF_INT 4 #define SIZEOF_UNSIGNED_INT 4 #define SIZEOF_FLOAT 4 #define SIZEOF_DOUBLE 8 #define SIZEOF_LONG 8 #define SIZEOF_UNSIGNED_LONG 8 #define SIZEOF_LONG_LONG 8 #define SIZEOF_UNSIGNED_LONG_LONG 8 #define SIZEOF_SIZE_T 8 #define SIZEOF_PTRDIFF_T 8 #define CXX_GNU 1 #define FC_INTEL 1 #define HAVE_FC_EXIT 1 #define HAVE_FC_FLUSH 1 #define HAVE_FC_GET_ENVIRONMENT_VARIABLE 1 #define HAVE_FC_LONG_LINES 1 #define HAVE_FC_NULL 1 #define FC_FUNC(name,NAME) name ## _ #define FC_FUNC_(name,NAME) name ## _ #define ABINIT_TARGET "x86_64_linux_intel11.1" #define HAVE_MPI 1 #define HAVE_MPI2 1 #define HAVE_SCALAPACK 1 #define HAVE_NETCDF 1 #define HAVE_ETSF_IO 1 #define HAVE_LIBXC 1 #define HAVE_BIGDFT 1 #define HAVE_WANNIER90 1 #define STDC_HEADERS 1 #define HAVE_STDIO_H 1 #define HAVE_SIGNAL_H 1 #define HAVE_GW_DPC 1 #define USE_MACROAVE 1 configure: exit 0
Attachment:
hcg.ac
Description: Binary data
- [abinit-forum] Compiling AB-INIT 6.0.1?, sonu kumar, 02/19/2010
- Re: [abinit-forum] Compiling AB-INIT 6.0.1?, Manuel Cotelo, 02/19/2010
- Re: [abinit-forum] Compiling AB-INIT 6.0.1?, sonu kumar, 02/19/2010
- Re: [abinit-forum] Compiling AB-INIT 6.0.1?, Yann Pouillon, 02/19/2010
- Re: [abinit-forum] Compiling AB-INIT 6.0.1?, Yann Pouillon, 02/19/2010
- Re: [abinit-forum] Compiling AB-INIT 6.0.1?, sonu kumar, 02/19/2010
- Re: [abinit-forum] Compiling AB-INIT 6.0.1?, sonu kumar, 02/21/2010
- Re: [abinit-forum] Compiling AB-INIT 6.0.1?, Manuel Cotelo, 02/19/2010
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