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Re: [abinit-forum] band/fft parallel calculations truncating or hanging when writing WFK files


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  • From: TORRENT Marc <marc.torrent@cea.fr>
  • To: forum@abinit.org
  • Subject: Re: [abinit-forum] band/fft parallel calculations truncating or hanging when writing WFK files
  • Date: Fri, 16 Apr 2010 09:50:45 +0200
  • Organization: CEA-DAM

Following new forum rules, a reply is there: http://forum.abinit.org/viewtopic.php?f=9&t=242

Marc Torrent

Le 15.04.2010 22:37, Eric J. Walter a écrit :

Hi,

I have been doing some calculations with using the parallel
abinit, specifically, I can't get my wavefunctions to written to disk
for some band and band/fft parallel jobs. This only occurs beyond a
certain system size. For instance, a 2x2x2 supercell of rutile writes
to disk correctly with both v5.8.4p and v6.0.3. Once I go to 2x2x3 or
larger, v5.8.4p exits with only a tiny fraction of the WFK file written
and v6.0.3 hangs after this same tiny fraction is written to disk.
(This happens when I run in a global parallel filespace (a PVFS directory)
or when I run in directories local to each node.)

I have tried two versions of the Intel compilers (11.1 and 10.1) and two
verisons of openmpi (1.3.2 and 1.2.5). Here is my configure statement:

./configure CC=mpicc FC=mpif90 --with-linalg-libs='-L/share/apps/intel/Compiler/11.1/069/mkl/lib/em64t/ -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -lguide -lpthread -lm' --with-scalapack-libs='-L/share/apps/intel/Compiler/11.1/069/mkl/lib/em64t/ -lmkl_scalapack' --enable-64bit-flags --enable-mpi --with-mpi-level=2 --enable-mpi-io

Here are the parallel parts of my input file:

paral_kgb 1
npfft 1
npband 16
npkpt 1
wfoptalg 14 # I have also tried '4'
fft_opt_lob 2
fftalg 401
accesswff 1


Has anyone else had this problem and found away around it?

Thanks,

Eric J. Walter
Department of Physics
College of William and Mary





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