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- From: "Cote Michel" <michel.cote@umontreal.ca>
- To: <forum@abinit.org>
- Subject: RE: [abinit-forum] On the Optimization of the atom potisions
- Date: Wed, 1 Oct 2003 08:32:41 -0400
Dear Yukihiro,
One possible explanation might be that your calculated forces are not precise
enough. From your input, I see that you are asking for a convergence in
toldfe of 10^-6 which implies that the calculated forces are not very
accurate, maybe 10^-3. This means that the Broyden algorithm does not have
accurate information of the potential surface to minimise the system to the
desire tolmxf of 5x10^-5 (default). In others words, the procedure is
affected by the noise in the calculated forces.
When you do a structural relaxation, it is always preferable to use the
convergence criterion toldff which should be smaller that the criterion of
the Broyden procedure tolmxf. See tutorial 1.3 for a longer explanation.
Michel
***************************************************************
Michel Cote tel: +1 (514) 343-5628
Professeur adjoint fax: +1 (514) 343-2071
Département de physique
Université de Montréal
C.P. 6128, succ. Centre-ville
Montréal (Québec) H3C 3J7 Michel.Cote@umontreal.ca
Canada http://www.phys.umontreal.ca/~michel_cote
***************************************************************
> -----Message d'origine-----
> De : okuno@osa.sci.jri.co.jp [mailto:okuno@osa.sci.jri.co.jp]
> Envoyé : 1 octobre, 2003 06:55
> À : forum@abinit.org
> Objet : [abinit-forum] On the Optimization of the atom potisions
>
>
> Dear Abinit Users.
>
> I'm now trying to optimize the atom positions
> of the LaGaO_{3} whose space group is Pnma and contains
> 20 atoms in the unit cell.
>
> I'm use abinit input option
> ionmov=2 and ntimes=100 but the results are
> not conversed.
>
> Abinit outputs WARNING like..
>
> fconv : WARNING -
> ntime= 100 was not enough Broyd/MD steps to converge gradients:
> max grad (force/stress) = 2.2787E-04 > tolmxf= 5.0000E-05
> ha/bohr (free atoms\
> )
>
> the results (max gfad(force/stress)) seems ossilate and not
> easy to conversed.
>
> Another try we take is to use molecular dynamics with damping
> factor that
> is
>
> ionmov=1, vis=400, dtion 200.0 and ntime= 500 and =1000.
>
> But the result seems that the atoms are moving with time and
> not converse
> to stable positions.
> Are there some techniques that optimize the atom positions in
> rather large
> cell?
>
> Some body know the ideas to optimize atom positions such system,
> it is my pleasure to teach me.
>
> Sincealy.
>
> Yukihiro Okuno
>
> My input file for optimization is like below
> #____ Here begins abinit input file
>
> #ndtset 2
>
> ionmov 2
> ntime 200
> #vis 400.0
> #dtion 200.0
> #ntime1 500.
> #ntome2 1000
>
>
>
>
> #Definition of the unit cell
> acell 10.365147 14.683171 10.436957
> rprim 1.0 0.0 0.0
> 0.0 1.0 0.0
> 0.0 0.0 1.0
>
> #Definition of the atom types
> ntype 3
> znucl 57 31 8 # for La, Ga, O
> #Definition of the atoms
> natom 20
> type 2 2 2 2 1 1 1 1 3 3 3 3 3 3 3 3 3 3 3 3
> xred
> 0.00000 0.0 0.5
> 0.50000 0.5 0.0
> 0.00000 0.5 0.5
> 0.50000 0.0 0.0
> -0.009900 0.250 -0.002900
> 0.490100 0.250 0.502900
> 0.009900 0.750 0.002900
> 0.509900 0.750 0.497100
> 0.498000 0.250 0.060000
> 0.998000 0.250 0.440000
> -0.498000 0.750 -0.060000
> 0.002000 0.750 0.560000
> 0.229000 0.037000 0.762000
> 0.729000 0.463000 -0.262000
> -0.229000 0.537000 -0.762000
> 0.271000 -0.037000 1.262000
> -0.229000 -0.037000 -0.762000
> 0.271000 0.537000 1.262000
> 0.229000 0.463000 0.762000
> 0.729000 0.037000 -0.262000
>
> #Definition of the planewave basis set
> #ecut1 40.0 # Maximal kinetic energy cut-off, in Hartree
> ecut 35.0
> #Definition of the k-point grid
> kptopt 1
> ngkpt 4 4 4
>
> #Definition of the SCF procedure
> nstep 100 # Maximal number of SCF cycles
> toldfe 1.0d-6 # Will stop when, twice in a row, the difference
> # between two consecutive evaluations of
> total energy
> # differ by less than toldfe (in Hartree)
> diemac 12.0 # Although this is not mandatory, it is worth to
> # precondition the SCF cycle. The model dielectric
> # function used as the standard preconditioner
> # is described in the "dielng" input
> variable section.
> # Here, we follow the prescription for bulk silicon.
>
>
>
- RE: [abinit-forum] On the Optimization of the atom potisions, Cote Michel, 10/01/2003
- <Possible follow-up(s)>
- Re: RE: [abinit-forum] On the Optimization of the atom potisions, okuno, 10/02/2003
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