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Re: Re: Re: Re: Re: Re: [abinit-forum] compilation error on a cluster for herald.par.f90


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  • From: "Anglade Pierre-Matthieu" <anglade@gmail.com>
  • To: forum@abinit.org
  • Subject: Re: Re: Re: Re: Re: Re: [abinit-forum] compilation error on a cluster for herald.par.f90
  • Date: Tue, 25 Jul 2006 09:47:20 +0200
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In this output, apart from abinit own code, I see only few files that
may require your function they are:
/opt/intel/mkl701cluster/lib/32/libguide.a
/opt/intel/mkl701cluster/lib/em64t/libmkl_def.so
/opt/intel/mkl701cluster/lib/em64t/libmkl_p4n.so
/opt/intel/mkl701cluster/lib/em64t/libmkl_lapack.a
/opt/mpich/intel/lib/libmpich.a
/opt/mpich/intel/lib/libfmpich.a

First things first:
1) you may have to remove /opt/intel/mkl701cluster/lib/32/libguide.a
this one is not made for your EMT64 or x86_64 machine. It may be
necessary to replace it with the 64bit version
2) it may be necessary to include the posix thread library since this
is what the error mesage told you. Have you tryed this ?

On 7/25/06, ilukacevic@fizika.unios.hr <ilukacevic@fizika.unios.hr> wrote:
This is the part of compilation just before the error

/opt/mpich/intel/bin/mpif90 -o abinip Src_main/abinip.o
Src_9drive/ar_9drive.a Src_8seqpar/ar_8abinip.a Src_7suscep/ar_7suscep.a
Src_6response/ar_6response.a Src_5common/ar_5common.a
Src_4iowfdenpot/ar_4iowfdenpot.a Src_4wfs/ar_4wfs.a Src_3gw/ar_3gw.a
Src_3ionetcdf/ar_3ionetcdf.a Src_3iovars/ar_3iovars.a Src_3paw/ar_3paw.a
Src_3recipspace/ar_3recipspace.a Src_3xc/ar_3xc.a Src_3xml/ar_3xml.a
Src_2nonlocal/ar_2nonlocal.a Src_2ffts/ar_2ffts.a Src_2psp/ar_2psp.a
Src_2geometry/ar_2geometry.a Src_2parser/ar_2parser.a
Src_2spacepar/ar_2spaceparp.a Src_1contract/ar_1contract.a
Src_1managempi/ar_1managempip.a Src_1util/ar_1util.a Src_0basis/ar_0basis.a
Src_defs/ar_defs.a Lib_fftnew/fftnewp.a Lib_numeric/numeric.a
Lib_numericf90/numericf90.a Lib_lapack/lapack.a Lib_blas/blas.a
-L/opt/mpich/intel/lib -lsvml -lcxa -static-libcxa
/opt/intel/mkl701cluster/lib/32/libguide.a
/opt/intel/mkl701cluster/lib/em64t/libmkl_def.so
/opt/intel/mkl701cluster/lib/em64t/libmkl_p4n.so /opt/i!
nt!
el/mkl701cluster/lib/em64t/libmkl_lapack.a -lunwind -lguide
/opt/mpich/intel/lib/libmpich.a /opt/mpich/intel/lib/libfmpich.a -Vaxlib ; \
chmod ugo+rx abinip

Is this a compilation of mpi lib?

I tried to lower the optimization to -o2 and -o1, but with no success. I am
sending also my makefile, just for report. In the meantime, I will try the
threading option.

I. Lukacevic




--
Pierre-Matthieu Anglade



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