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Re: [abinit-forum] Re: Abinit 5.3.4


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  • From: Masayoshi Mikami <mmikami@rc.m-kagaku.co.jp>
  • To: forum@abinit.org
  • Subject: Re: [abinit-forum] Re: Abinit 5.3.4
  • Date: Fri, 6 Apr 2007 18:07:55 +0900

Salut,

Yes, the problem here was very similar, looks like this:
< >Total DC energy in eV = <C0><8C>R<D0><F0><BC><C9><96>
> >Total DC energy in eV = -9.06352021670248E+02
and your modification did work after checking diff.t06 etc.
(not with fldiff.report) Merci bien !

By the way, the problem with t88 looks like this:
(snip)
< E^0_gap 11.838
> E^0_gap 9.363
1116
< E^GW_gap 12.303
> E^GW_gap 9.518
1117
< DeltaE^GW_gap 0.465
> DeltaE^GW_gap 0.155
1119
< New Fermi energy : 2.051841E-01 Ha , 5.583344E+00 eV
> New Fermi energy : 2.463957E-01 Ha , 6.704768E+00 eV
1373
< +Overall time at end (sec) : cpu= 27.3 wall= 27.3
> +Overall time at end (sec) : cpu= 66.9 wall= 75.2

Cheers, and Bon weekend,
Masayoshi

On 2007/04/06, at 15:49, Anglade Pierre-Matthieu wrote:

Hi,

For me the problem on tests
v4:t04-08
and v4:t88
is only at the line where the "Total DC energy in eV" is printed. Do
you have other differences ?
For my case, I get some output like:
< >Total DC energy in eV = ^N*w(c)<9a>¥¿
>Total DC energy in eV = -4.15475259271129E+02
But I was incorrect when reporting my trick. The line 279 must be
changed by something like:
if (optdc==2) write(message, '(a)') ch10
or if (optdc==2) write(message, '(a)') " "
With this mod, the printed number is correct but the line is obvously
changed : so the report keep saying the test is not OK yet PAW users
will be able to read the energy in a much more human friendly way :-)

regards

PMA

On 4/6/07, Masayoshi Mikami <mmikami@rc.m-kagaku.co.jp> wrote:
Dear all,

Please let me correct something. After rebooting,
some tests passed successfully. (v4:86,87, 92,93,94)
I suspect hardware problems with my Mac(G5),
e.g. memory...
Still, the situation remains the same with v4:t04-08
and v4:t88 .

Cheers,
Masayoshi

On 2007/04/05, at 20:49, Masayoshi Mikami wrote:

> Salut !
>
> Please let me have a similar report with MacOSX(Tiger, 10.4.9)
> and gfortran (version 4.3.0 20061223 (experimental)).
>
> v1-v3 : no fatal problems
> v4: t04-t08, the same problem with the printout of
> "the total DC energy", even after the remedy by Pierre-Matthieu.
> v4:t86, t87 ... sudden death (NB: no problems with v.5.3.3 !)
> v4:t88, the big numerical difference
> v4: t92, sudden death, t93 many NaN, t94 sudden death
> (NB: no problems of v4:t92-94 with v.5.3.3 on the same Mac,
> interestingly ...)
> v5: t08, 09; the same problem with the DC total energy...
>
> So something seemed to happen between v.5.3.3 and v.5.3.4 ...
> at least for the MacOSX/gfortran.
> (I did not try with MacOSX/XLF8.1. How was the results ?)
>
> Cheers,
> Masayoshi
>
> On 2007/04/05, at 18:20, Anglade Pierre-Matthieu wrote:
>
>> Hi guys,
>>
>> For me, under linux (fc6 on x86_64 nocona and core duo), with
>> gfortran
>> (4.2.0 20070110 and 4.2.0 20070317) the tests results for abinit
>> 5.3.4
>> is as follows:
>> V1: OK
>> V2: OK
>> V3:
>> - t19 gives a large discrepancy on an unconverged SCF cycle. This is
>> a very old problem and maybe a bug.
>> - t83 has too many differents line but is in fact perfectly OK
>> V4:
>> T06, t07, t08, have a problem at printing the Total DC energy in eV.
>> This is a bug. It is easily solved by changing in 15comon/ prtene.F90
>> line 279 from:
>> if (optdc==2) message=""
>> to
>> if (optdc==2) message=" "
>> or by removing this line.
>> The "" is misunterpeted by gfortran and causes a bug that appears
>> only
>> for this compiler (we may think the bug is in fact a gfortran
>> bug). It
>> hought I had commited a fix for that. Apparently this was not the
>> case.
>>
>> t88: This is a real abinit/gfortran bug for GW self consistent. It is
>> known since v5.3.2 (at least) and matteo giantomassi is investigating
>> the case.
>>
>> V5:
>> t08: same PAW problem as v4 t06-08
>>
>> So, unless you are conducting self-consistent GW calculations
>> gfortran
>> compiled (latest gfortran 4.2 I mean) is safe with abinit 5.3.4.
>> What is the version o gfortran you use Nuno ? I
>> reagards
>>
>> PMA
>>
>> On 4/4/07, Anglade Pierre-Matthieu <anglade@gmail.com> wrote:
>>> HI,
>>>
>>> Those tests are (mostly v3, v4) PAW and GW tests. They undergoes
>>> problem with gfortran before the final merges. Yet I was thinking
>>> most
>>> of the problems with gfortran were fixed during 5.3.2-> 5.3.3. and
>>> then fixed better again in the 5.3.3 -> 5.3.4 by Marc and Matteo. I
>>> haven't already checked what's up with 5.3.4.+gfortran.
>>> I'll tell you tomorrow.
>>>
>>> regards
>>>
>>> PMA
>>>
>>> On 4/4/07, Nuno A. G. Bandeira <nuno.bandeira@ist.utl.pt> wrote:
>>> > gay@sfu.ca wrote:
>>> > > I found recent versions of gfortran gave big errors on
>>> > > tests v2, 61-66, which did not happen with earlier (Oct 06)
>>> > > versions of gfortran. Do you find this?
>>> > >
>>> > Yes I do ! v2-21,58,61-66 have a failure report. Also
>>> v3-30,31,57 and 97
>>> > fail and so too do v4-8,57,84-88 and v5-63.
>>> > Does anyone on the development team see a pattern or are these
>>> tests
>>> > totally unrelated ?
>>> >
>>> > I had noticed this with previous editions of abinit but since they
>>> > weren't so many compared to the full range of tests I didn't
>>> pay too
>>> > much attention.
>>> >
>>> > It has also been my experience that g95 makes pretty good
>>> binaries but
>>> > they are painfully slow and the people at AMD have yet to make
>>> a g95
>>> > compiled ACML for Windows. The one I use is a special hack of a
>>> g77
>>> > binary libacml to become usable with gfortran. ACML makes it
>>> run much
>>> > faster. The benchmark tests are run from an x86-64 platform and my
>>> > humble pentium 4 can beat the timings for most of them.
>>> >
>>> > pgf90 is comparable in performance to gfortran+acml.
>>> >
>>> > --
>>> > Nuno A. G. Bandeira, AMRSC
>>> > Graduate researcher and molecular sculptor
>>> > Inorganic and Theoretical Chemistry Group,
>>> > Faculty of Science
>>> > University of Lisbon - C8 building, Campo Grande,
>>> > 1749-016 Lisbon,Portugal
>>> > http://cqb.fc.ul.pt/intheochem/nuno.html
>>> > Doctoral student @ IST,Lisbon
>>> > --
>>> >
>>> >
>>>
>>>
>>> --
>>> Pierre-Matthieu Anglade
>>>
>>
>>
>> --
>> Pierre-Matthieu Anglade
>>
>
>




--
Pierre-Matthieu Anglade







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