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Parallelization over bands/fft


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  • From: Maurice de Koning <dekoning@ifi.unicamp.br>
  • To: forum@abinit.org
  • Subject: Parallelization over bands/fft
  • Date: Fri, 01 Jun 2007 14:26:51 -0300

Dear all,

I noticed strange behavior while using the bands/fft parallelization features of abinip (compiled with -DMPI_FFT preprocessor flag),
running on an SGI Altix system with 16 CPU´s.

The calculation in question involves a geometry optimization using only the gamma point:

1) The first calculation was run using the parameters:

npbands=8, npfft=2

This calculation runs fine and the geometry optimization converges without any trouble.

2) Then I tried a different distribution, using the parameters

npbands=16, npfft=1

According to the documentation, this should be more efficient than the first choice.

But while running this calculation something strange happens. After a while, only a few
of the 16 CPU´s are actually processing, with the remainder in "uninterruptable sleep".
This already occurs during the first SCF cycle, effectively interrupting the progress of
the calculation.

Any ideas?

Cheers,

Maurice




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