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- From: Maurice de Koning <dekoning@ifi.unicamp.br>
- To: forum@abinit.org
- Subject: Parallelization over bands/fft
- Date: Fri, 01 Jun 2007 14:26:51 -0300
Dear all,
I noticed strange behavior while using the bands/fft parallelization features of abinip (compiled with -DMPI_FFT preprocessor flag),
running on an SGI Altix system with 16 CPU´s.
The calculation in question involves a geometry optimization using only the gamma point:
1) The first calculation was run using the parameters:
npbands=8, npfft=2
This calculation runs fine and the geometry optimization converges without any trouble.
2) Then I tried a different distribution, using the parameters
npbands=16, npfft=1
According to the documentation, this should be more efficient than the first choice.
But while running this calculation something strange happens. After a while, only a few
of the 16 CPU´s are actually processing, with the remainder in "uninterruptable sleep".
This already occurs during the first SCF cycle, effectively interrupting the progress of
the calculation.
Any ideas?
Cheers,
Maurice
- Parallel GW Problem, Maurice de Koning, 06/01/2007
- Re: [abinit-forum] Parallel GW Problem, Fabien Bruneval, 06/01/2007
- Parallelization over bands/fft, Maurice de Koning, 06/01/2007
- Re: [abinit-forum] Parallelization over bands/fft, gilles zerah, 06/02/2007
- Re: [abinit-forum] Parallelization over bands/fft, Maurice de Koning, 06/04/2007
- Re: [abinit-forum] Parallelization over bands/fft, Gilles Zerah, 06/04/2007
- Re: [abinit-forum] Parallelization over bands/fft, Xavier Gonze, 06/04/2007
- Re: [abinit-forum] Parallelization over bands/fft, gilles zerah, 06/04/2007
- Re: [abinit-forum] Parallelization over bands/fft, Gilles Zerah, 06/04/2007
- Re: [abinit-forum] Parallelization over bands/fft, Maurice de Koning, 06/04/2007
- Re: [abinit-forum] Parallelization over bands/fft, gilles zerah, 06/02/2007
- Parallelization over bands/fft, Maurice de Koning, 06/01/2007
- Re: [abinit-forum] Parallel GW Problem, Deyu Lu, 06/01/2007
- Re: [abinit-forum] Parallel GW Problem, Fabien Bruneval, 06/01/2007
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