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Re: [abinit-forum] How to make an ion


Chronological Thread 
  • From: Thierry Deutsch <thierry.deutsch@cea.fr>
  • To: forum@abinit.org
  • Cc: Luigi Genovese <Luigi.Genovese@esrf.fr>
  • Subject: Re: [abinit-forum] How to make an ion
  • Date: Tue, 10 Mar 2009 17:58:20 +0100

Difficult question...

Assume that we can calculate exactly the ground state of O + H far away each other.

What is the ground state of this system?

I guess it is O- and H+.
So there is a charge transfer even if you have no interaction. This is correct because we want the ground state and the oxygen is more electronegative than H.

I did the calculation with BigDFT (wavelet part of ABINIT) forcing the initial configuration to 1 electron to H. I found effectively H+ and O- (separation to 20 bohr).

I think it is not related to functional because this comes from electrostatic effect.

Best Regards
6671011@163.com a écrit :
Dear Thierry,

I'd like to question further on this issue with an example.

For a system with two atoms: H and O, which are separated by very large
distance (say several hundred Angstroms). Almost all of the present programs
show that there is a charge transfer between them. Experimentally, however, it
is absolutely wrong.

Someone said this problem is beyond the Born-Oppenheimer approximation. Is
that
true?


Sincerely,
Guangfu Luo



----------------------------------------------------------------------------------------------------
Hi,

ABINIT can use periodic Poisson solver based on plane waves or Poisson solver
for isolated system. The last one is based on wavelet (exactly interpolating
scaling functions). If you use plane waves to represent wavefunctions, there
is
no difference for neutral systems. In this case, the dependence of the kinetic term versus the size of the box is
predominant (plane waves delocalize).
For charged system, (as H3O+), the Poisson solver based on wavelet is more
accurate and uses very very less memory.
If you calculate NH3 and H3O+ together in a big box, you only need to specify
the total charge. The system should localize an electron on H3O. Because you have molecules, you should have 1 for occupied states
(spin-polarized case).
An alternative is also to use the whole wavelet part of ABINIT... The
advantage
is to use less memory.
Best Regards,

Thierry

-----------------------------------
Thierry Deutsch Laboratoire de simulation atomistique (L_Sim) INAC/SP2M Tél:(33) 04 38 78 34 06
C.E.A.Grenoble Fax:(33) 04 38 78 51 97
17, Avenue des Martyrs mailto:Thierry.Deutsch@cea.fr
38054 GRENOBLE CEDEX 9 FRANCE http://inac.cea.fr/L_Sim


----------------------------------------------------------------------------------------------------
Quan Phung Manh a écrit :

After calculating NH4+, I have more question.
If I have a big box with a molecule NH3 and an ion H3O+ for example. How can I
simulate it? How can I sure that the charge + is in H3O, not NH3? Can I solve
this by using occ?
Best regarded



--
-----------------------------------------------------------------------
Thierry Deutsch Laboratoire de simulation atomistique (L_Sim)
INAC/SP2M Tél:(33) 04 38 78 34 06
C.E.A.Grenoble Fax:(33) 04 38 78 51 97
17, Avenue des Martyrs mailto:Thierry.Deutsch@cea.fr
38054 GRENOBLE CEDEX 9 FRANCE http://inac.cea.fr/L_Sim
-----------------------------------------------------------------------




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