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Re: [abinit-forum] Large-cell calculations


Chronological Thread 
  • From: Latévi Max LAWSON DAKU <Max.Lawson@unige.ch>
  • To: forum@abinit.org
  • Subject: Re: [abinit-forum] Large-cell calculations
  • Date: Sun, 22 Nov 2009 00:27:00 +0100



On 21. 11. 09 22:51, Yann Pouillon wrote:
Hi,

Hi, Yann,

I thank you a lot for your answer.


Latévi Max LAWSON DAKU <Max.Lawson@unige.ch> ha escrito:

I would like to use the band/FFT/k-point parallelisation, and several
distributions have been proposed for the number of processors.
The distributions retained read (npkpt, npband, npfft)=(2, 150, x),
with x a positive integer.

But the calculations tend to be extremely slow even when using
3000 cpus. In this last case, the code actually segfaults after having
output:

ITER STEP NUMBER 1
vtorho : nnsclo_now= 2, note that nnsclo,dbl_nnsclo,istep= 0 0 1
**** In vtorho for isppol= 1
starting lobpcg, with nblockbd,mpi_enreg%nproc_band 1 150
condition number of the Gram matrix= 59476636.484308563
Lobpcgccwf: restart performed

I have the same problem with nanotubes using PAW on a different architecture. The segfault disappears when I reduce the cell size (which in absolute I don't want). I've been trying to change the following parameters:

* increasing nband
* varying npband, npfft, bandpp
* increasing diecut, dielam
* varying iprcel, iprcch
* increasing nnsclo
* trying both metallic and non-metallic nanotubes


Unfortunately, I cannot reduce the cell size. But I will also play with these
parameters.

All the best,
Max


I also very carefully checked the positions of the atoms. But the electronic ground-state SCF never converges.

I'm pretty sure there is a memory leak somewhere, but I was unable to locate it. Smells to me like a problem in the preconditioning, but may be elsewhere.

If somebody has more insight about this, I would greatly appreciate any hint.

Best regards,

Yann.


--
***********************************************
Latevi Max LAWSON DAKU
Universite de Geneve - Sciences II
30, quai Ernest-Ansermet CH-1211 Geneve 4 Switzerland
Tel: (41) 22/379 6548 ++ Fax: (41) 22/379 6103
***********************************************




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