Skip to Content.
Sympa Menu

forum - Re: [abinit-forum] Re: Memory Corruption with abinip/abinis

forum@abinit.org

Subject: The ABINIT Users Mailing List ( CLOSED )

List archive

Re: [abinit-forum] Re: Memory Corruption with abinip/abinis


Chronological Thread 
  • From: Keitel Cervantes Salguero <kacsssj@gmail.com>
  • To: forum@abinit.org
  • Subject: Re: [abinit-forum] Re: Memory Corruption with abinip/abinis
  • Date: Mon, 8 Mar 2010 17:24:05 +0100
  • Domainkey-signature: a=rsa-sha1; c=nofws; d=gmail.com; s=gamma; h=mime-version:in-reply-to:references:date:message-id:subject:from:to :content-type; b=eXmK6XomZruMu/df11hHCbzZZy8PqM6X93IuNuXyD7HvxZOnrThTrymjBgyVPGBPXO eQRCCPlsMk0BAmFAmtJb9HpBibEeFLUdVGAPFs8iRTy91yzs/i7Q1+SWKEGf5yEOzG0R CdcVdTJLm9bpwtaE8F91CyKnwnyjPUgsNFZXc=

Hi Mamikon,

It says "  -  " ?
Anyway, it seems that the code have a case in which the
memory needed is negative. Maybe you can search
that part on the code and know when this case is on.

Regards

On Mon, Mar 8, 2010 at 5:13 PM, mamikon Gulian <mamikon.armen.gulian@gmail.com> wrote:
Strange things in the log file:

Total amount of disk space required by _KSS file =  -450.94 Mb.

  Subdivided into :
  Header             =     0.82 Mb.
  KB elements        =   108.62 Mb.
  Wavefunctions (PW) =  -560.38 Mb.
  PAW projectors     =     0.00 Mb.


 Opening file for KS structure output: nt-nonscf_o_KSS
 number of Gamma centered plane waves  53927
 number of Gamma centered shells  53927
 number of bands  52235
 maximum angular momentum components      3
 number of symmetry operations  1 (without inversion)
   *   g( 1)=  0  0  0
   *   g( 2)=  1  0  0
   *   g( 3)= -1  0  0
   *   g( 4)=  0  1  0
   *   g( 5)=  0 -1  0
   *   g( 6)=  1  1  0
   *   g( 7)= -1  1  0
   *   g( 8)=  1 -1  0
   *   g(****)=-13  2-11
   *   g(****)=  2 13-11
   *   g(****)= -2 13-11
   *   g(****)=  2-13-11
   *   g(****)= -2-13-11
   *   g(****)= 13 -2-11
   *   g(****)=-13 -2-11

-P-0000
-P-0000  k-point   1
-P-0000  Calculating <G|H|G'> elements


On Mon, Mar 8, 2010 at 11:00 AM, mamikon Gulian <mamikon.armen.gulian@gmail.com> wrote:
Dear ABINITers,

I got the following unexpected error with ABINIT 5.8.4. This occurs during a non-scf KSS file calculation, after the program writes the g-vectors to the file and begins to calculate < G | H | G > elements.

Running with mpi (Open MPI 1.4.1), 11 cpus: glibc detected *** abinip: malloc(): memory corruption: 0x0000000002e0ac50 ***

I though it was a bug with MPI, so I tried a sequential run:  *** glibc detected *** abinis: malloc(): memory corruption: 0x0000000004d80260 ***

I never got such an error before. Anyone have an idea?

Thanks

Mamikon




--
Atte.
Keitel Cervantes Salguero



Archive powered by MHonArc 2.6.16.

Top of Page